RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 Q8N976 141 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 TAF15Q92804 592 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 STARD4Q96DR4 205 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 LINC00470Q9BZP3 86 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 SEPSECSQ9HD40 501 aaKnown RBP13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 FBXL7Q9UJT9 491 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 TRAPPC2LQ9UL33 140 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 LOXL2Q9Y4K0 774 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 ARHGAP21Q5T5U3 1957 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 DOCK10Q96BY6 2186 aa13.42□□□□□ -0.26
CHMP1A-201ENST00000397901 A0A1W2PR80 420 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 FAM166BA8MTA8 275 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 SS18L1O75177 396 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 CLDN1O95832 211 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 VASH2Q86V25 355 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 SIGLECL1Q8N7X8 197 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 SLC25A22Q9H936 323 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 TIMM9Q9Y5J7 89 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 DNAJC13O75165 2243 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 MED12LQ86YW9 2145 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 PCSK5Q92824 1860 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 TRAV30A0A087WSZ9 112 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 KRTDAPP60985 99 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 RPS16P62249 146 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 FFAR4Q5NUL3 377 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 BAGE3Q86Y29 109 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 BAGE2Q86Y30 109 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 KLHDC1Q8N7A1 406 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 SGMS2Q8NHU3 365 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 CSTL1Q9H114 145 aa13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 LIN7CQ9NUP9 197 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 BOKQ9UMX3 212 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 MRPS16Q9Y3D3 137 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-201ENST00000397901 HSBP1L1C9JCN9 74 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 RPL19P84098 196 aaKnown RBP13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 PLP2Q04941 152 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 C3AR1Q16581 482 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 Q6P435 159 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 GATAD1Q8WUU5 269 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 ARRDC1-AS1Q9H2J1 176 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 PIGBOS1A0A0B4J2F0 54 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 OR5B21A6NL26 309 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 TMPRSS2O15393 492 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 TNFSF4P23510 183 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 CLDN18P56856 261 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 RPS20P60866 119 aaKnown RBP13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 Q0VG73 95 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 ACSM6Q6P461 480 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 C6orf15Q6UXA7 325 aaPredicted RBP13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 MCEMP1Q8IX19 187 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 CT55Q8WUE5 264 aa13.4□□□□□ -0.26
CHMP1A-201ENST00000397901 LRP5LA4QPB2 252 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 M0QZ24 198 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 HINT1P49773 126 aaPredicted RBP13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 Q6ZVH6 145 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 FGFRL1Q8N441 504 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 DRAM1Q8N682 238 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 SLC35D1Q9NTN3 355 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 AHCTF1Q8WYP5 2266 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 OR2H2O95918 312 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 ARR3P36575 388 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 MPC1Q9Y5U8 109 aa13.39□□□□□ -0.27
CHMP1A-201ENST00000397901 BDP1A6H8Y1 2624 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 C1QTNF9BB2RNN3 333 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 NPIPB11E5RHQ5 1161 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 PAGE4O60829 102 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 SERPINA7P05543 415 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 GPX1P07203 203 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 MAGEA5P43359 124 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 TCTEX1D1Q8N7M0 179 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 OR2M7Q8NG81 312 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 MRPL18Q9H0U6 180 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 CDC42EP3Q9UKI2 254 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 URB1O60287 2271 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 TMEM238C9JI98 176 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 RAMP3O60896 148 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 NPPCP23582 126 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 FAM53AQ6NSI3 398 aaPredicted RBP13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 SPRY4Q9C004 299 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 C12orf49Q9H741 205 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 CLN8Q9UBY8 286 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 RNF114Q9Y508 228 aa13.38□□□□□ -0.27
CHMP1A-201ENST00000397901 J3QT63 122 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 MT-CO3P00414 261 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 SP9P0CG40 484 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 TSPOP30536 169 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 ZNF816Q0VGE8 651 aaPredicted RBP13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 OCIAD2Q56VL3 154 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 ZNF497Q6ZNH5 498 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 SFRP2Q96HF1 295 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 FAM103A1Q9BTL3 118 aaKnown RBP13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 PKIBQ9C010 78 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 DOCK11Q5JSL3 2073 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 TRAV9-1A0A075B6T8 112 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 TRAV34A0A0B4J273 112 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 MDFIC2A0A1B0GVS7 189 aa13.37□□□□□ -0.27
CHMP1A-201ENST00000397901 M0R296 226 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms