RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 LRRC37A5PQ49AS3 106 aa15.72■□□□□ 0.11
PDLIM2-205ENST00000397761 LAMTOR1Q6IAA8 161 aa15.72■□□□□ 0.11
PDLIM2-205ENST00000397761 PRSS54Q6PEW0 395 aa15.72■□□□□ 0.11
PDLIM2-205ENST00000397761 H2BFWTQ7Z2G1 175 aa15.72■□□□□ 0.11
PDLIM2-205ENST00000397761 LHFPL4Q7Z7J7 247 aa15.72■□□□□ 0.11
PDLIM2-205ENST00000397761 AJUBAQ96IF1 538 aa15.72■□□□□ 0.11
PDLIM2-205ENST00000397761 RHOVQ96L33 236 aa15.72■□□□□ 0.11
PDLIM2-205ENST00000397761 HIF1ANQ9NWT6 349 aa15.72■□□□□ 0.11
PDLIM2-205ENST00000397761 CENPVL3A0A0U1RRI6 287 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 K7EPK0 472 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 ST8SIA3O43173 380 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 EPHA1P21709 976 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 TMEM249Q2WGJ8 235 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 C9orf62Q8N4C0 152 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 FAM71E2Q8N5Q1 922 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 OR4C13Q8NGP0 309 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 THAP6Q8TBB0 222 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 AIFM2Q9BRQ8 373 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 MBD2Q9UBB5 411 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 AUP1Q9Y679 476 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 POMT1Q9Y6A1 747 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 OTOGQ6ZRI0 2925 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 CSPG4Q6UVK1 2322 aa15.71■□□□□ 0.11
PDLIM2-205ENST00000397761 FAM90A26D6RGX4 464 aa15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 DEDDO75618 318 aa15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 SNAPC5O75971 98 aa15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 IGHV4-31P0DP07 118 aa15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 NKX2-1P43699 371 aaPredicted RBP15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 ERVK-16P61578 105 aa15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 CXorf66Q5JRM2 361 aaPredicted RBP15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 PDZD9Q8IXQ8 264 aa15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 CFHR4Q92496 578 aa15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 FLYWCH2Q96CP2 140 aaKnown RBP15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 C11orf1Q9H5F2 150 aa15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 RCL1Q9Y2P8 373 aaKnown RBP15.71■□□□□ 0.1
PDLIM2-205ENST00000397761 FXYD6-FXYD2A0A087WZ82 144 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 SRRM4A7MD48 611 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 H7C2Y5 167 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 J3QLI3 93 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 LGALS4P56470 323 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 OR4A47Q6IF82 309 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 CCDC144NLQ6NUI1 221 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 WFDC11Q8NEX6 87 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 DMBX1Q8NFW5 382 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 OR1S1Q8NH92 325 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 GRPEL2Q8TAA5 225 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 C7orf69Q9H7B7 122 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 TMEM140Q9NV12 185 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 OR5AC2Q9NZP5 309 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 TNFSF18Q9UNG2 199 aa15.7■□□□□ 0.1
PDLIM2-205ENST00000397761 NPFFO15130 113 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 OR9G9P0C7N8 305 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 CD1BP29016 333 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 S100A10P60903 97 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 LGALSLQ3ZCW2 172 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 MOB3BQ86TA1 216 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 FOXRED2Q8IWF2 684 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 VKORC1L1Q8N0U8 176 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 PUSL1Q8N0Z8 303 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 DYNAPQ8N1N2 210 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 MALSU1Q96EH3 234 aa15.69■□□□□ 0.1
PDLIM2-205ENST00000397761 IGHV1-69DA0A0B4J2H0 117 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 A0A1W2PRD5 423 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 A0A1W2PRF3 423 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 A0A1W2PRM7 423 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 TIMM23O14925 209 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 SHOXO15266 292 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 SCGB1D2O95969 90 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 IGLV2-23P01705 113 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 IGHV1-69P01742 117 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 SAA4P35542 130 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 RELBQ01201 579 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 ZNF546Q86UE3 836 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 PIP4P2Q8N4L2 257 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 MAPK1IP1LQ8NDC0 245 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 RBMXL1Q96E39 390 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 HARBI1Q96MB7 349 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 RNF5Q99942 180 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 MS4A7Q9GZW8 240 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 BET1LQ9NYM9 111 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 HSPB7Q9UBY9 170 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 HILPDAQ9Y5L2 63 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 PLXNB1O43157 2135 aa15.68■□□□□ 0.1
PDLIM2-205ENST00000397761 ARPC5O15511 151 aa15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 RLN2P04090 185 aa15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 CXCL2P19875 107 aa15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 LGALS7P47929 136 aa15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 PDLIM3Q53GG5 364 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 SSX9Q7RTT3 188 aa15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 ZNF429Q86V71 674 aa15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 C17orf50Q8WW18 174 aa15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 LSM5Q9Y4Y9 91 aaKnown RBP15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 CELSR1Q9NYQ6 3014 aa15.67■□□□□ 0.1
PDLIM2-205ENST00000397761 IGHV3-72A0A0B4J1Y9 119 aa15.66■□□□□ 0.1
PDLIM2-205ENST00000397761 VENTXO95231 258 aa15.66■□□□□ 0.1
PDLIM2-205ENST00000397761 POLR2GP62487 172 aaKnown RBP eCLIP15.66■□□□□ 0.1
PDLIM2-205ENST00000397761 TNFRSF9Q07011 255 aa15.66■□□□□ 0.1
PDLIM2-205ENST00000397761 ZNF345Q14585 488 aa15.66■□□□□ 0.1
PDLIM2-205ENST00000397761 SSX2Q16385 188 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms