RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CCDC144NLQ6NUI1 221 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 H2BFWTQ7Z2G1 175 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 OR2T35Q8NGX2 323 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 CACNG5Q9UF02 275 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 NSG2Q9Y328 171 aa17.06■□□□□ 0.32
CPNE1-204ENST00000397443 DUXBA0A1W2PPF3 345 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 OR2A4O95047 310 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 GIPP09681 153 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-204ENST00000397443 HES1Q14469 280 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 Q5BKY6 102 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 DHRS7BQ6IAN0 325 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-204ENST00000397443 Q6ZRM9 215 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 FOXRED2Q8IWF2 684 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 OR4C13Q8NGP0 309 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 CFHR4Q92496 578 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 RHOVQ96L33 236 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 C2orf50Q96LR7 162 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 OR2A7Q96R45 310 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 COMMD9Q9P000 198 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 FAM96BQ9Y3D0 163 aa17.05■□□□□ 0.32
CPNE1-204ENST00000397443 ATG12O94817 140 aa17.04■□□□□ 0.32
CPNE1-204ENST00000397443 IGKV1D-33P01593 117 aa17.04■□□□□ 0.32
CPNE1-204ENST00000397443 IGKV1-33P01594 117 aa17.04■□□□□ 0.32
CPNE1-204ENST00000397443 THOC7Q6I9Y2 204 aaKnown RBP17.04■□□□□ 0.32
CPNE1-204ENST00000397443 MS4A7Q9GZW8 240 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-204ENST00000397443 RBMXL2O75526 392 aaKnown RBP17.04■□□□□ 0.32
CPNE1-204ENST00000397443 VENTXO95231 258 aa17.04■□□□□ 0.32
CPNE1-204ENST00000397443 FBLN7Q53RD9 439 aa17.04■□□□□ 0.32
CPNE1-204ENST00000397443 IL17RELQ6ZVW7 336 aa17.04■□□□□ 0.32
CPNE1-204ENST00000397443 ZBTB8BQ8NAP8 495 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-204ENST00000397443 LSM10Q969L4 123 aaKnown RBP17.04■□□□□ 0.32
CPNE1-204ENST00000397443 TMEM140Q9NV12 185 aa17.04■□□□□ 0.32
CPNE1-204ENST00000397443 MMP24Q9Y5R2 645 aa17.04■□□□□ 0.32
CPNE1-204ENST00000397443 OOSP1A8MZH6 123 aa17.03■□□□□ 0.32
CPNE1-204ENST00000397443 BOLA2-SMG1P6H3BVE0 249 aa17.03■□□□□ 0.32
CPNE1-204ENST00000397443 HRASP01112 189 aa17.03■□□□□ 0.32
CPNE1-204ENST00000397443 SNRNP70P08621 437 aaKnown RBP17.03■□□□□ 0.32
CPNE1-204ENST00000397443 CNTFRP26992 372 aa17.03■□□□□ 0.32
CPNE1-204ENST00000397443 KRTAP1-1Q07627 177 aa17.03■□□□□ 0.32
CPNE1-204ENST00000397443 TMEM177Q53S58 311 aa17.03■□□□□ 0.32
CPNE1-204ENST00000397443 FAM120AOSQ5T036 256 aa17.03■□□□□ 0.32
CPNE1-204ENST00000397443 OR1S1Q8NH92 325 aa17.03■□□□□ 0.32
CPNE1-204ENST00000397443 TRAV3A0A0B4J244 114 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 PIGBOS1A0A0B4J2F0 54 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 OR9G9P0C7N8 305 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 OR2B8PP59922 312 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 S100A10P60903 97 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 RAP2BP61225 183 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 OR4A47Q6IF82 309 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 OSR1Q8TAX0 266 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-204ENST00000397443 NANPQ8TBE9 248 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 PPP1R1CQ8WVI7 109 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 SMR3AQ99954 134 aa17.02■□□□□ 0.32
CPNE1-204ENST00000397443 SAA1P0DJI8 122 aaPredicted RBP17.02■□□□□ 0.31
CPNE1-204ENST00000397443 BCL6BQ8N143 479 aaPredicted RBP17.02■□□□□ 0.31
CPNE1-204ENST00000397443 SPIN2AQ99865 258 aa17.02■□□□□ 0.31
CPNE1-204ENST00000397443 SPIN2BQ9BPZ2 258 aa17.02■□□□□ 0.31
CPNE1-204ENST00000397443 YAE1D1Q9NRH1 226 aa17.02■□□□□ 0.31
CPNE1-204ENST00000397443 TNCP24821 2201 aa17.01■□□□□ 0.31
CPNE1-204ENST00000397443 CD1BP29016 333 aa17.01■□□□□ 0.31
CPNE1-204ENST00000397443 ARHGDIBP52566 201 aa17.01■□□□□ 0.31
CPNE1-204ENST00000397443 SMCO1Q147U7 214 aa17.01■□□□□ 0.31
CPNE1-204ENST00000397443 TCTE3Q8IZS6 198 aa17.01■□□□□ 0.31
CPNE1-204ENST00000397443 NMES1Q9C002 83 aa17.01■□□□□ 0.31
CPNE1-204ENST00000397443 NUP50Q9UKX7 468 aa17.01■□□□□ 0.31
CPNE1-204ENST00000397443 MDFIC2A0A1B0GVS7 189 aa17■□□□□ 0.31
CPNE1-204ENST00000397443 SLC25A17O43808 307 aa17■□□□□ 0.31
CPNE1-204ENST00000397443 HNRNPCP07910 306 aaKnown RBP eCLIP17■□□□□ 0.317e-7■■■□□ 17.1
CPNE1-204ENST00000397443 P0C879 139 aa17■□□□□ 0.31
CPNE1-204ENST00000397443 CYCSP99999 105 aaKnown RBP17■□□□□ 0.31
CPNE1-204ENST00000397443 RAB32Q13637 225 aa17■□□□□ 0.31
CPNE1-204ENST00000397443 CXorf66Q5JRM2 361 aaPredicted RBP17■□□□□ 0.31
CPNE1-204ENST00000397443 LSM5Q9Y4Y9 91 aaKnown RBP17■□□□□ 0.31
CPNE1-204ENST00000397443 A0A1B0GU03 582 aa17■□□□□ 0.31
CPNE1-204ENST00000397443 CD5LO43866 347 aa17■□□□□ 0.31
CPNE1-204ENST00000397443 HABP2Q14520 560 aaPredicted RBP17■□□□□ 0.31
CPNE1-204ENST00000397443 MAGT1Q9H0U3 335 aa17■□□□□ 0.31
CPNE1-204ENST00000397443 NAV3Q8IVL0 2385 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 PLXNB1O43157 2135 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 MOSP00540 346 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 IGLV2-23P01705 113 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 BRS3P32247 399 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 SRSF4Q08170 494 aaKnown RBP16.99■□□□□ 0.31
CPNE1-204ENST00000397443 MMDQ15546 238 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 OR4D5Q8NGN0 318 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 EAF1Q96JC9 268 aaPredicted RBP16.99■□□□□ 0.31
CPNE1-204ENST00000397443 TPSG1Q9NRR2 321 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 MXRA5Q9NR99 2828 aa16.99■□□□□ 0.31
CPNE1-204ENST00000397443 MBPP02686 304 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-204ENST00000397443 FBP1P09467 338 aa16.98■□□□□ 0.31
CPNE1-204ENST00000397443 NKX2-5P52952 324 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-204ENST00000397443 F2RL1P55085 397 aa16.98■□□□□ 0.31
CPNE1-204ENST00000397443 ZFP69Q49AA0 526 aa16.98■□□□□ 0.31
CPNE1-204ENST00000397443 SPINK9Q5DT21 86 aa16.98■□□□□ 0.31
CPNE1-204ENST00000397443 OR4A16Q8NH70 328 aa16.98■□□□□ 0.31
CPNE1-204ENST00000397443 G3V3Q6 166 aa16.98■□□□□ 0.31
CPNE1-204ENST00000397443 SPNS3Q6ZMD2 512 aa16.98■□□□□ 0.31
CPNE1-204ENST00000397443 OR2T10Q8NGZ9 312 aa16.98■□□□□ 0.31
CPNE1-204ENST00000397443 QTRT1Q9BXR0 403 aaKnown RBP16.98■□□□□ 0.31
CPNE1-204ENST00000397443 MYOD1P15172 320 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms