RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SCAF4O95104 1147 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 SPDEFO95238 335 aa15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 RAB32Q13637 225 aa15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 HIST2H2BCQ6DN03 193 aa15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 WDR89Q96FK6 387 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 RAB40CQ96S21 281 aa15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 MS4A7Q9GZW8 240 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 C7orf69Q9H7B7 122 aa15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 ZNRD1Q9P1U0 126 aa15.39■□□□□ 0.05
TSPAN4-204ENST00000397404 A0A1W2PPI3 338 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 WRBO00258 174 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 NPFFO15130 113 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 OR2F2O95006 317 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 BRS3P32247 399 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 OR2F1Q13607 317 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 VMA21Q3ZAQ7 101 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 PDLIM3Q53GG5 364 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 CYB5R2Q6BCY4 276 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 ZNF546Q86UE3 836 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 FAM71E2Q8N5Q1 922 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 OR4A16Q8NH70 328 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 HARBI1Q96MB7 349 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 CIB3Q96Q77 187 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 PRNDQ9UKY0 176 aa15.38■□□□□ 0.05
TSPAN4-204ENST00000397404 ARHGAP32A7KAX9 2087 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 IGHV1-69DA0A0B4J2H0 117 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 A0A0D9SG52 128 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 CENPVL3A0A0U1RRI6 287 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 GPR137BO60478 399 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 IGHV1-69P01742 117 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 MBPP02686 304 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 REG1BP48304 166 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 TAS2R30P59541 319 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 S100A10P60903 97 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 UBE2KP61086 200 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 KLRD1Q13241 179 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 MOB3BQ86TA1 216 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 THNSL2Q86YJ6 484 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 TMEM140Q9NV12 185 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 HSPB7Q9UBY9 170 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 ZNF257Q9Y2Q1 563 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 VPS13CQ709C8 3753 aa15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 ASH1LQ9NR48 2969 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-204ENST00000397404 ABCA2Q9BZC7 2435 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 FXYD6-FXYD2A0A087WZ82 144 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 TRAV14DV4A0A0A6YYC5 116 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 K7EPK0 472 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 IGKV1-16P04430 117 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 IL6RP08887 468 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 IGHV4-31P0DP07 118 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 LINC00205P59089 165 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 RPS16P62249 146 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 LRRC37A5PQ49AS3 106 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 ACOT7LQ6ZUV0 252 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 TEX45Q8NA69 505 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 OR8H1Q8NGG4 311 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 MBD2Q9UBB5 411 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 TNFSF18Q9UNG2 199 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 WSB1Q9Y6I7 421 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 MED13LQ71F56 2210 aa15.36■□□□□ 0.05
TSPAN4-204ENST00000397404 A0A0G2JRQ6 117 aa15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 RBMXL2O75526 392 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 TGFAP01135 160 aa15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 P2RY1P47900 373 aa15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 DYNLT3P51808 116 aa15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 OR4A47Q6IF82 309 aa15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 PUSL1Q8N0Z8 303 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 OR11H4Q8NGC9 324 aa15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 FOXA2Q9Y261 457 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-204ENST00000397404 C15orf61A6NNL5 157 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 SMLR1H3BR10 107 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 SYNGR2O43760 224 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 SCGB1D2O95969 90 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 MAS1LP35410 378 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 SAA4P35542 130 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 SPCS3P61009 180 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 TNFRSF9Q07011 255 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 EBI3Q14213 229 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 DIAPH2-AS1Q14236 149 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 AANATQ16613 207 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 OR2T10Q8NGZ9 312 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 OR5B3Q8NH48 314 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 DCUN1D4Q92564 292 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 CLCC1Q96S66 551 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 RNF126Q9BV68 326 aa15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 PRRC2AP48634 2157 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-204ENST00000397404 L7N2F9 121 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 TIMM23O14925 209 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 KBTBD11O94819 623 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 MOSP00540 346 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 FAM106CPP0CH98 169 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 ATP5IP56385 69 aaPredicted RBP15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 VAMP2P63027 116 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 RPP30P78346 268 aaKnown RBP15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 Q5BKY6 102 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 Q6ZRM9 215 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 MRPL41Q8IXM3 137 aaKnown RBP15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 TMEM167AQ8TBQ9 72 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 CFHR4Q92496 578 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 AQP10Q96PS8 301 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms