RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 KRASP01116 189 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 IGKV1D-33P01593 117 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 IGKV1-33P01594 117 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 SNRNP70P08621 437 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 SLC25A6P12236 298 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 HES1Q14469 280 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 FCN2Q15485 313 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 GGNBP1Q5YKI7 109 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 THOC7Q6I9Y2 204 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 CLEC9AQ6UXN8 241 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 GSG1LQ6UXU4 331 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 H2BFWTQ7Z2G1 175 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 OR8H1Q8NGG4 311 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 RHOVQ96L33 236 aa18.94■□□□□ 0.62
TSPAN4-202ENST00000397396 MAP1AP78559 2803 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-202ENST00000397396 ADAP1O75689 374 aa18.93■□□□□ 0.62
TSPAN4-202ENST00000397396 G6PCP35575 357 aa18.93■□□□□ 0.62
TSPAN4-202ENST00000397396 CYCSP99999 105 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-202ENST00000397396 CDC42EP3Q9UKI2 254 aa18.93■□□□□ 0.62
TSPAN4-202ENST00000397396 CSPG4Q6UVK1 2322 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 C5orf51A6NDU8 294 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 TMEM11P17152 192 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 UBE2KP61086 200 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 NMSQ5H8A3 153 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 OR4A5Q8NH83 315 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 EAF1Q96JC9 268 aaPredicted RBP18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 PDCD10Q9BUL8 212 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 C1RLQ9NZP8 487 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 KIAA1456Q9P272 454 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 CACFD1Q9UGQ2 172 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 PITPNC1Q9UKF7 332 aa18.92■□□□□ 0.62
TSPAN4-202ENST00000397396 A0A1B0GU03 582 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 BTBD17A6NE02 478 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 FAM25EA8MYX2 175 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 IGKV1-5P01602 117 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 ZDHHC16Q969W1 377 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 SSX3Q99909 188 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 TMEM140Q9NV12 185 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 COA4Q9NYJ1 87 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 BET1LQ9NYM9 111 aa18.91■□□□□ 0.62
TSPAN4-202ENST00000397396 C13orf42A0A1B0GVH6 325 aa18.9■□□□□ 0.62
TSPAN4-202ENST00000397396 FGF2P09038 288 aa18.9■□□□□ 0.62
TSPAN4-202ENST00000397396 DEFB112Q30KQ8 113 aa18.9■□□□□ 0.62
TSPAN4-202ENST00000397396 TEX45Q8NA69 505 aa18.9■□□□□ 0.62
TSPAN4-202ENST00000397396 OR11H7Q8NGC8 314 aa18.9■□□□□ 0.62
TSPAN4-202ENST00000397396 OR5R1Q8NH85 324 aa18.9■□□□□ 0.62
TSPAN4-202ENST00000397396 PRDM13Q9H4Q3 707 aa18.9■□□□□ 0.62
TSPAN4-202ENST00000397396 CCSO14618 274 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 NBR2O15453 112 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 OR2A4O95047 310 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 GIPP09681 153 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 P0C879 139 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 SAA1P0DJI8 122 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 PAX6P26367 422 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 SMCO1Q147U7 214 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 MMDQ15546 238 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 IAH1Q2TAA2 248 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 OR4A47Q6IF82 309 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 SSX9Q7RTT3 188 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 PUSL1Q8N0Z8 303 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 Q8N6K4 173 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 C2orf50Q96LR7 162 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 OR2A7Q96R45 310 aa18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 ZNF436Q9C0F3 470 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 RANBP3Q9H6Z4 567 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-202ENST00000397396 SNAPC5O75971 98 aa18.88■□□□□ 0.61
TSPAN4-202ENST00000397396 AKAP14Q86UN6 197 aa18.88■□□□□ 0.61
TSPAN4-202ENST00000397396 BCL6BQ8N143 479 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-202ENST00000397396 NPBQ8NG41 125 aa18.88■□□□□ 0.61
TSPAN4-202ENST00000397396 GPR146Q96CH1 333 aa18.88■□□□□ 0.61
TSPAN4-202ENST00000397396 SMR3AQ99954 134 aa18.88■□□□□ 0.61
TSPAN4-202ENST00000397396 ZNF469Q96JG9 3925 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 OTOGQ6ZRI0 2925 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 SRRM4A7MD48 611 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 KBTBD11O94819 623 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 NDUFA3O95167 84 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 IGLV2-23P01705 113 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 CXCL3P19876 107 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 PSG5Q15238 335 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 C2orf68Q2NKX9 166 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 IL17RELQ6ZVW7 336 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 C16orf82Q7Z2V1 217 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 FOXRED2Q8IWF2 684 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 OR4A16Q8NH70 328 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 NMES1Q9C002 83 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 ZFP57Q9NU63 452 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 CACNG5Q9UF02 275 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 PRNDQ9UKY0 176 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 TCF19Q9Y242 345 aa18.87■□□□□ 0.61
TSPAN4-202ENST00000397396 A0A0G2JRQ6 117 aa18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 H3BUX3 64 aa18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 RRHO14718 337 aa18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 SLC25A17O43808 307 aa18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 CD24P25063 80 aa18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 SRSF4Q08170 494 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 HNF4GQ14541 408 aa18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 RBMS3Q6XE24 437 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 Q6YL49 198 aa18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 VKORC1L1Q8N0U8 176 aa18.86■□□□□ 0.61
TSPAN4-202ENST00000397396 ZBTB8BQ8NAP8 495 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms