RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 SHOXO15266 292 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 PITX3O75364 302 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 AVPP01185 164 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 FGF2P09038 288 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 SMCO1Q147U7 214 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 AARDQ4LEZ3 155 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 CIARTQ8N365 385 aaPredicted RBP10.21□□□□□ -0.78
LMCD1-202ENST00000397386 DMBX1Q8NFW5 382 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 OR4D5Q8NGN0 318 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 MS4A7Q9GZW8 240 aaPredicted RBP10.21□□□□□ -0.78
LMCD1-202ENST00000397386 GSKIPQ9P0R6 139 aa10.21□□□□□ -0.78
LMCD1-202ENST00000397386 CYSRT1A8MQ03 144 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 FAM90A26D6RGX4 464 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 VENTXO95231 258 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 HNRNPCP07910 306 aaKnown RBP eCLIP10.2□□□□□ -0.78
LMCD1-202ENST00000397386 IL6RP08887 468 aaPredicted RBP10.2□□□□□ -0.78
LMCD1-202ENST00000397386 PET100P0DJ07 73 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 PSMB6P28072 239 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 BRS3P32247 399 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 DYNLT3P51808 116 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 EBI3Q14213 229 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 ZFP69Q49AA0 526 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 KLF17Q5JT82 389 aaPredicted RBP10.2□□□□□ -0.78
LMCD1-202ENST00000397386 Q6ZRM9 215 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 THNSL2Q86YJ6 484 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 HARBI1Q96MB7 349 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 MEGF9Q9H1U4 602 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.2□□□□□ -0.78
LMCD1-202ENST00000397386 BET1LQ9NYM9 111 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 CACNG5Q9UF02 275 aa10.2□□□□□ -0.78
LMCD1-202ENST00000397386 G3V3Q6 166 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 SNAPC5O75971 98 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 MPC2O95563 127 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 FSHBP01225 129 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 IGHV4-38-2P0DP08 117 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 RPS16P62249 146 aaKnown RBP10.19□□□□□ -0.78
LMCD1-202ENST00000397386 ID3Q02535 119 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 OR4A47Q6IF82 309 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 FOXRED2Q8IWF2 684 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 PUSL1Q8N0Z8 303 aaKnown RBP10.19□□□□□ -0.78
LMCD1-202ENST00000397386 DYNAPQ8N1N2 210 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 OR4A5Q8NH83 315 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 OR1S1Q8NH92 325 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 NANPQ8TBE9 248 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 C17orf50Q8WW18 174 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 WDR89Q96FK6 387 aaPredicted RBP10.19□□□□□ -0.78
LMCD1-202ENST00000397386 HYLS1Q96M11 299 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 TSNAXQ99598 290 aaKnown RBP10.19□□□□□ -0.78
LMCD1-202ENST00000397386 TMEM140Q9NV12 185 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 VPS13CQ709C8 3753 aa10.19□□□□□ -0.78
LMCD1-202ENST00000397386 IGHV3-72A0A0B4J1Y9 119 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 SRRM4A7MD48 611 aaKnown RBP10.18□□□□□ -0.78
LMCD1-202ENST00000397386 ST8SIA3O43173 380 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 SPDEFO95238 335 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 MOSP00540 346 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 IGLV2-23P01705 113 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 SLC25A4P12235 298 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 NKX2-1P43699 371 aaPredicted RBP10.18□□□□□ -0.78
LMCD1-202ENST00000397386 UBE2KP61086 200 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 AANATQ16613 207 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 NOXA1Q86UR1 476 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 ZNF429Q86V71 674 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 OR2T10Q8NGZ9 312 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 MYO9AB2RTY4 2548 aa10.18□□□□□ -0.78
LMCD1-202ENST00000397386 FLNAP21333 2647 aaKnown RBP10.18□□□□□ -0.78
LMCD1-202ENST00000397386 SMAD7O15105 426 aaKnown RBP10.17□□□□□ -0.78
LMCD1-202ENST00000397386 CD5LO43866 347 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 KBTBD11O94819 623 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 MBPP02686 304 aaPredicted RBP10.17□□□□□ -0.78
LMCD1-202ENST00000397386 RLN2P04090 185 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 FBP1P09467 338 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 SAA1P0DJI8 122 aaPredicted RBP10.17□□□□□ -0.78
LMCD1-202ENST00000397386 LYL1P12980 280 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 RELBQ01201 579 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 RAB32Q13637 225 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 VMA21Q3ZAQ7 101 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 PDLIM3Q53GG5 364 aaPredicted RBP10.17□□□□□ -0.78
LMCD1-202ENST00000397386 Q5BKY6 102 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 C11orf87Q6NUJ2 197 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 TMEM65Q6PI78 240 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 BRD3OSQ6XYD6 125 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 C9orf139Q6ZV77 190 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 SSX9Q7RTT3 188 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 VKORC1L1Q8N0U8 176 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 TEX45Q8NA69 505 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 OR52E5Q8NH55 327 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 THAP6Q8TBB0 222 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 TMEM167AQ8TBQ9 72 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 ITGB1BP2Q9UKP3 347 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 NUP50Q9UKX7 468 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 FAM96BQ9Y3D0 163 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 POMT1Q9Y6A1 747 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 CSMD1Q96PZ7 3565 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 SETXQ7Z333 2677 aaKnown RBP10.17□□□□□ -0.78
LMCD1-202ENST00000397386 TRAV14DV4A0A0A6YYC5 116 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 A0A0U1RQK1 487 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 C15orf61A6NNL5 157 aa10.17□□□□□ -0.78
LMCD1-202ENST00000397386 HMSDA8MTL9 139 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms