RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CDK10Q15131 360 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 C10orf55Q5SWW7 151 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 CLEC19AQ6UXS0 136 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 MMD2Q8IY49 270 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 SLC38A6Q8IZM9 456 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 OR2C3Q8N628 320 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 OR4A4PQ8NGN8 299 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 MARC2Q969Z3 335 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 ADTRPQ96IZ2 230 aa11.08□□□□□ -0.64
SEC13-206ENST00000397102 URM1Q9BTM9 101 aaKnown RBP11.08□□□□□ -0.64
SEC13-206ENST00000397102 FOXI3A8MTJ6 420 aaPredicted RBP11.07□□□□□ -0.64
SEC13-206ENST00000397102 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
SEC13-206ENST00000397102 SAA1P0DJI8 122 aaPredicted RBP11.07□□□□□ -0.64
SEC13-206ENST00000397102 C8orf88P0DMB2 117 aa11.07□□□□□ -0.64
SEC13-206ENST00000397102 MED14OSP0DP75 135 aa11.07□□□□□ -0.64
SEC13-206ENST00000397102 CEACAM19Q7Z692 300 aa11.07□□□□□ -0.64
SEC13-206ENST00000397102 LRRTM1Q86UE6 522 aa11.07□□□□□ -0.64
SEC13-206ENST00000397102 FAM89BQ8N5H3 189 aa11.07□□□□□ -0.64
SEC13-206ENST00000397102 FBLIM1Q8WUP2 373 aa11.07□□□□□ -0.64
SEC13-206ENST00000397102 SPAG8Q99932 426 aaPredicted RBP11.07□□□□□ -0.64
SEC13-206ENST00000397102 CMSS1Q9BQ75 279 aaKnown RBP11.07□□□□□ -0.64
SEC13-206ENST00000397102 UBQLN2Q9UHD9 624 aa11.07□□□□□ -0.64
SEC13-206ENST00000397102 NPIPB5A8MRT5 1133 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 BET1O15155 118 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 CD3GP09693 182 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 DUTP33316 252 aaKnown RBP11.06□□□□□ -0.64
SEC13-206ENST00000397102 TMEM50BP56557 158 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 TCTAP57738 103 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 RBM48Q5RL73 367 aaKnown RBP11.06□□□□□ -0.64
SEC13-206ENST00000397102 ZFP1Q6P2D0 407 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 LINC00336Q6ZUF6 198 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 PHYHIPQ92561 330 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 EEF1AKMT3Q96AZ1 226 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 CABLES2Q9BTV7 478 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 MFFQ9GZY8 342 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 MRPL27Q9P0M9 148 aaKnown RBP11.06□□□□□ -0.64
SEC13-206ENST00000397102 MUC4Q99102 2169 aa11.06□□□□□ -0.64
SEC13-206ENST00000397102 TRBV6-7A0A0A0MS04 114 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 EFCAB10A6NFE3 127 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 HMX3A6NHT5 357 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 LINC00473A8K010 186 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 TEX22C9J3V5 150 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 FABP7O15540 132 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 ATP5HO75947 161 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 DIRAS3O95661 229 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 IFNA4P05014 189 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 CD37P11049 281 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 INSL4Q14641 139 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 RBMS2Q15434 407 aaKnown RBP11.05□□□□□ -0.64
SEC13-206ENST00000397102 ZNF585BQ52M93 769 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 IGSF11Q5DX21 431 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 C19orf35Q6ZS72 473 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 ZNF555Q8NEP9 628 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 OR6M1Q8NGM8 313 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 OR10J5Q8NHC4 309 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 ARHGAP5-AS1Q96IT6 56 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 FANCD2OSQ96PS1 177 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 PECRQ9BY49 303 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 RBM7Q9Y580 266 aaKnown RBP11.05□□□□□ -0.64
SEC13-206ENST00000397102 S4R3C0 116 aa11.05□□□□□ -0.64
SEC13-206ENST00000397102 DPPA5A6NC42 116 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 CTRB1P17538 263 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 GALP22466 123 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 ELLP55199 621 aaPredicted RBP11.04□□□□□ -0.64
SEC13-206ENST00000397102 NANOS2P60321 138 aaKnown RBP11.04□□□□□ -0.64
SEC13-206ENST00000397102 ST3GAL4Q11206 333 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 MED22Q15528 200 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 KLK9Q2XQG4 91 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 ODF3L2Q3SX64 289 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 ACSM3Q53FZ2 586 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 CTRB2Q6GPI1 263 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 C11orf45Q8TAV5 145 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 C2CD4CQ8TF44 421 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 GALNT14Q96FL9 552 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 FYTTD1Q96QD9 318 aaKnown RBP11.04□□□□□ -0.64
SEC13-206ENST00000397102 C5orf66Q9H5L9 145 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 MAP6D1Q9H9H5 199 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 FBXL17Q9UF56 701 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
SEC13-206ENST00000397102 A0A1B0GVY2 172 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 TSPAN4O14817 238 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 DHFRP00374 187 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 CRYGCP07315 174 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 GSTT2P0CG29 244 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 GSTT2BP0CG30 244 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 RPL35AP18077 110 aaKnown RBP11.03□□□□□ -0.64
SEC13-206ENST00000397102 PSMB6P28072 239 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 FCGR2BP31994 310 aaPredicted RBP11.03□□□□□ -0.64
SEC13-206ENST00000397102 WNT4P56705 351 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 SETD9Q8NE22 299 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
SEC13-206ENST00000397102 SLC2A9Q9NRM0 540 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 UFC1Q9Y3C8 167 aa11.03□□□□□ -0.64
SEC13-206ENST00000397102 TRBV7-1A0A0A6YYK4 115 aa11.02□□□□□ -0.65
SEC13-206ENST00000397102 MYL12BO14950 172 aa11.02□□□□□ -0.65
SEC13-206ENST00000397102 CDK1P06493 297 aa11.02□□□□□ -0.65
SEC13-206ENST00000397102 IL6RP08887 468 aaPredicted RBP11.02□□□□□ -0.65
SEC13-206ENST00000397102 MYOD1P15172 320 aa11.02□□□□□ -0.65
SEC13-206ENST00000397102 HIST1H1BP16401 226 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms