RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 IFI27L2Q9H2X8 130 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 GAB2Q9UQC2 676 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 AMMECR1Q9Y4X0 333 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-202ENST00000396828 ALG5Q9Y673 324 aa8.2□□□□□ -1.1
NEDD8-202ENST00000396828 A0A1W2PPE3 182 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 WI2-2373I1.2A0A1W2PRP0 233 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 TCRBV4S1A1TA0A5B7 111 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 CRYM-AS1A6NIL9 109 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 J3QR06 171 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 MPPED1O15442 326 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 B3GALNT1O75752 331 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 IGLV1-47P01700 117 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 HTR1DP28221 377 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 DHODHQ02127 395 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 CATR1Q13166 79 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 DHRS2Q13268 280 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 PPP1R1AQ13522 171 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 KCTD9Q7L273 389 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 CENPVQ7Z7K6 275 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-202ENST00000396828 LYG2Q86SG7 212 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 TBC1D26Q86UD7 250 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 LINC00311Q8N616 119 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF596Q8TC21 504 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF431Q8TF32 576 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-202ENST00000396828 CAPSLQ8WWF8 208 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 HSD17B10Q99714 261 aaKnown RBP8.19□□□□□ -1.1
NEDD8-202ENST00000396828 SLC25A33Q9BSK2 321 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 NAA60Q9H7X0 242 aa8.19□□□□□ -1.1
NEDD8-202ENST00000396828 HUWE1Q7Z6Z7 4374 aaKnown RBP8.18□□□□□ -1.1
NEDD8-202ENST00000396828 SAA2-SAA4A0A096LPE2 208 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 PIGBOS1A0A0B4J2F0 54 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 C3orf85A0A1B0GTC6 90 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 A0A1B0GVG6 124 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 C9orf170A2RU37 121 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 C7orf66A4D0T2 115 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 LY6LH3BQJ8 138 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 SLC31A2O15432 143 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 TNFSF12O43508 249 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 SSNA1O43805 119 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 PGLYRP1O75594 196 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-202ENST00000396828 SFT2D2O95562 160 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 IGLV2-14P01704 120 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 SAA2P0DJI9 122 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-202ENST00000396828 PF4V1P10720 104 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF66Q6ZN08 573 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 C18orf65Q6ZTR6 163 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 COQ8AQ8NI60 647 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 TMEM230Q96A57 120 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 RBM14Q96PK6 669 aaKnown RBP8.18□□□□□ -1.1
NEDD8-202ENST00000396828 PHB2Q99623 299 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 SEC22CQ9BRL7 303 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 LIN7CQ9NUP9 197 aaKnown RBP8.18□□□□□ -1.1
NEDD8-202ENST00000396828 SDHAF2Q9NX18 166 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 DPM3Q9P2X0 92 aa8.18□□□□□ -1.1
NEDD8-202ENST00000396828 A0A0B4J293 547 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 M0R1X1 148 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 DUS4LO95620 317 aaKnown RBP8.17□□□□□ -1.1
NEDD8-202ENST00000396828 F2RP25116 425 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 CEACAM3P40198 252 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 SRPXP78539 464 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 DIAPH2-AS1Q14236 149 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 FAM71F2Q6NXP2 309 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 ETV3LQ6ZN32 361 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 TCTEX1D1Q8N7M0 179 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 OR52B4Q8NGK2 314 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 CASTOR1Q8WTX7 329 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 GALNT14Q96FL9 552 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 ADTRPQ96IZ2 230 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 MED28Q9H204 178 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 PRELID3BQ9Y3B1 194 aa8.17□□□□□ -1.1
NEDD8-202ENST00000396828 TSSC4Q9Y5U2 329 aaPredicted RBP8.17□□□□□ -1.1
NEDD8-202ENST00000396828 LEUTXA8MZ59 168 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 H0Y980 276 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 BUB1B-PAK6H3BSN5 160 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 TXNL1O43396 289 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 OR2F2O95006 317 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 SERPINE2P07093 398 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 OR5AC1P0C628 307 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 THBS3P49746 956 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 BCAP31P51572 246 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 SUPT4H1P63272 117 aaKnown RBP8.16□□□□□ -1.1
NEDD8-202ENST00000396828 RPL39P5Q59GN2 51 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 C9orf152Q5JTZ5 239 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 TPTE2P1Q5T6R2 138 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF833PQ6ZTB9 187 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 ZNF329Q86UD4 541 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 ODF3L1Q8IXM7 274 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 C12orf45Q8N5I9 185 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-202ENST00000396828 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 UXS1Q8NBZ7 420 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 OR51H1Q8NH63 302 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 CD300LFQ8TDQ1 290 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 MITD1Q8WV92 249 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 TCTEX1D2Q8WW35 142 aa8.16□□□□□ -1.1
NEDD8-202ENST00000396828 RBMXL1Q96E39 390 aaKnown RBP8.16□□□□□ -1.1
NEDD8-202ENST00000396828 DNAH7Q8WXX0 4024 aa8.15□□□□□ -1.1
NEDD8-202ENST00000396828 A0A0B4J2A0 478 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms