RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PRELID1Q9Y255 219 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 SAA2-SAA4A0A096LPE2 208 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 CTXND1A0A1B0GTU2 59 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 ZFP92A6NM28 416 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 C1orf196B1AJZ1 125 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 IFNA17P01571 189 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 OR4A8P0C604 315 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 SAA2P0DJI9 122 aaPredicted RBP13.83□□□□□ -0.2
NUP50-202ENST00000396096 RAB5AP20339 215 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 AGAP20933 346 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 BSPH1Q075Z2 132 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 TFF3Q07654 80 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 FOXC1Q12948 553 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 SPINK9Q5DT21 86 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 FAM216BQ8N7L0 139 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 DEFB108BQ8NET1 73 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 TMEM140Q9NV12 185 aa13.83□□□□□ -0.2
NUP50-202ENST00000396096 TRGV8A0A0C4DH27 118 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 SOX15O60248 233 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 IGHV3-7P01780 117 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 HOXA1P49639 335 aaPredicted RBP13.82□□□□□ -0.2
NUP50-202ENST00000396096 LEAP2Q969E1 77 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 LHX4Q969G2 390 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 GGACTQ9BVM4 153 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 WDR83OSQ9Y284 106 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 ZGRF1Q86YA3 2104 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 NKX6-3A6NJ46 265 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 B4DEV8 164 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 C17orf112F2Z3M2 114 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 OR2C1O95371 312 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 TAGLN2P37802 199 aaKnown RBP13.82□□□□□ -0.2
NUP50-202ENST00000396096 CEBPGP53567 150 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 DLK1P80370 383 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 MRPS11P82912 194 aaKnown RBP13.82□□□□□ -0.2
NUP50-202ENST00000396096 POU2AF1Q16633 256 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 RBMS3Q6XE24 437 aaKnown RBP13.82□□□□□ -0.2
NUP50-202ENST00000396096 SSX9Q7RTT3 188 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 OR10A7Q8NGE5 316 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 SNRNP40Q96DI7 357 aaKnown RBP13.82□□□□□ -0.2
NUP50-202ENST00000396096 SIRT7Q9NRC8 400 aa13.82□□□□□ -0.2
NUP50-202ENST00000396096 RPUSD1Q9UJJ7 312 aaKnown RBP13.82□□□□□ -0.2
NUP50-202ENST00000396096 ANKRD11Q6UB99 2663 aaPredicted RBP13.82□□□□□ -0.2
NUP50-202ENST00000396096 hADV38S2A0JD32 116 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 CXorf65A6NEN9 183 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 TMPRSS3P57727 454 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 RAB11AP62491 216 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 PNRC1Q12796 327 aaPredicted RBP13.81□□□□□ -0.2
NUP50-202ENST00000396096 FFAR4Q5NUL3 377 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 TGIF2LYQ8IUE0 185 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 FAM24BQ8N5W8 94 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 Q8N7P7 452 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 ZNF709Q8N972 641 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 OR10G9Q8NGN4 311 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 OR10G7Q8NGN6 311 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 ACTR3CQ9C0K3 210 aaPredicted RBP13.81□□□□□ -0.2
NUP50-202ENST00000396096 DCAF16Q9NXF7 216 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 LINC00312Q9Y6C7 94 aa13.81□□□□□ -0.2
NUP50-202ENST00000396096 TRAV3A0A0B4J244 114 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 C15orf61A6NNL5 157 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 PRSS46E5RG02 174 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 GFRA3O60609 400 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 CCL8P80075 99 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 MEF2CQ06413 473 aaPredicted RBP13.8□□□□□ -0.2
NUP50-202ENST00000396096 SLC25A48Q6ZT89 311 aaKnown RBP13.8□□□□□ -0.2
NUP50-202ENST00000396096 VKORC1L1Q8N0U8 176 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 ZNF383Q8NA42 475 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 TCF19Q9Y242 345 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 FOXA2Q9Y261 457 aaPredicted RBP13.8□□□□□ -0.2
NUP50-202ENST00000396096 TET2Q6N021 2002 aaPredicted RBP13.8□□□□□ -0.2
NUP50-202ENST00000396096 TRAV38-1A0A0B4J264 116 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 A0A1W2PPE3 182 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 MPDU1O75352 247 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 IFNA4P05014 189 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 CD1BP29016 333 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 RPS16P62249 146 aaKnown RBP13.8□□□□□ -0.2
NUP50-202ENST00000396096 LINC00518Q8N0U6 118 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 ZFP82Q8N141 532 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 C2CD4CQ8TF44 421 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 SCNM1Q9BWG6 230 aa13.8□□□□□ -0.2
NUP50-202ENST00000396096 TLE1Q04724 770 aa13.79□□□□□ -0.2
NUP50-202ENST00000396096 HEPN1Q6WQI6 88 aa13.79□□□□□ -0.2
NUP50-202ENST00000396096 C1QL4Q86Z23 238 aa13.79□□□□□ -0.2
NUP50-202ENST00000396096 LYG1Q8N1E2 194 aa13.79□□□□□ -0.2
NUP50-202ENST00000396096 RHOVQ96L33 236 aa13.79□□□□□ -0.2
NUP50-202ENST00000396096 HEYLQ9NQ87 328 aaPredicted RBP13.79□□□□□ -0.2
NUP50-202ENST00000396096 TMEM14BQ9NUH8 114 aa13.79□□□□□ -0.2
NUP50-202ENST00000396096 hCG_1809904A0A1W2PP81 198 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 A0A1W2PR64 198 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 A0A1W2PRV1 198 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 VSTM5A8MXK1 200 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 SEC14L6B5MCN3 397 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 MMP23AO75900 390 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 IFNA10P01566 189 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 IL6RP08887 468 aaPredicted RBP13.78□□□□□ -0.2
NUP50-202ENST00000396096 RBPJQ06330 500 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 ACOT6Q3I5F7 207 aaPredicted RBP13.78□□□□□ -0.2
NUP50-202ENST00000396096 PRR30Q53SZ7 412 aaPredicted RBP13.78□□□□□ -0.2
NUP50-202ENST00000396096 OR4A47Q6IF82 309 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 C1orf87Q8N0U7 546 aa13.78□□□□□ -0.2
NUP50-202ENST00000396096 ZCCHC14Q8WYQ9 949 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms