RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 ZNF331Q9NQX6 463 aaPredicted RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 ZNF586Q9NXT0 402 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 RIMS3Q9UJD0 308 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 ATAD5Q96QE3 1844 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 C2orf16Q68DN1 1984 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 RRHO14718 337 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 TAX1BP3O14907 124 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BKO60814 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 RENP00797 406 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 P01737 135 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BJP06899 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 FGF3P11487 239 aaPredicted RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BOP23527 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BBP33778 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 RPL22P35268 128 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BDP58876 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BCP62807 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 COL10A1Q03692 680 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 PMVKQ15126 192 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST2H2BEQ16778 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 IQCJQ1A5X6 159 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 FAM153CQ494X1 144 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 SPANXN3Q5MJ09 141 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 C20orf196Q8IYI0 205 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 RNF175Q8N4F7 328 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 OR4A5Q8NH83 315 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 LMX1AQ8TE12 382 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BHQ93079 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BNQ99877 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 HIST1H2BMQ99879 126 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 WDR61Q9GZS3 305 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 EXOSC3Q9NQT5 275 aaKnown RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 DNAJC27Q9NZQ0 273 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 MDFICQ9P1T7 246 aa3.45□□□□□ -1.86
HERC4-204ENST00000395198 PCYT1BQ9Y5K3 369 aaPredicted RBP3.45□□□□□ -1.86
HERC4-204ENST00000395198 TANC1Q9C0D5 1861 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 SHISA9B4DS77 424 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 CCL22O00626 93 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 ERGP11308 486 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 RPL34P49207 117 aaKnown RBP3.44□□□□□ -1.86
HERC4-204ENST00000395198 CRISP3P54108 245 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 TGIF1Q15583 401 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 TTC9CQ8N5M4 171 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 KRTCAP2Q8N6L1 136 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 MFSD8Q8NHS3 518 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 C3orf14Q9HBI5 128 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 HEBP1Q9NRV9 189 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 TMEM100Q9NV29 134 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 ZNF257Q9Y2Q1 563 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 SNX11Q9Y5W9 270 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 TNRC6CQ9HCJ0 1690 aaKnown RBP3.44□□□□□ -1.86
HERC4-204ENST00000395198 A0A0U1RQV1 116 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 H3BQ15 152 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 M0R233 179 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 NTN1O95631 604 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 CPSF4O95639 269 aaKnown RBP3.44□□□□□ -1.86
HERC4-204ENST00000395198 MPGP29372 298 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 ACVRL1P37023 503 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 PTGDSP41222 190 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 NDUFV3P56181 108 aaKnown RBP3.44□□□□□ -1.86
HERC4-204ENST00000395198 PRR30Q53SZ7 412 aaPredicted RBP3.44□□□□□ -1.86
HERC4-204ENST00000395198 FAM182AQ5T1J6 154 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 C17orf64Q86WR6 236 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 SPACA5Q96QH8 159 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 ULBP3Q9BZM4 244 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 IL36AQ9UHA7 158 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 MYO10Q9HD67 2058 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 CACNA1EQ15878 2313 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 A0A0B4J2A0 478 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 TEX48A0A1B0GUV7 120 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 A0A1B0GXF2 115 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 ADARB2-AS1A8MUL3 147 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 NEURL1O76050 574 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 GUCA1AP43080 201 aaPredicted RBP3.44□□□□□ -1.86
HERC4-204ENST00000395198 CTBP2P56545 445 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 PRDX1Q06830 199 aaKnown RBP3.44□□□□□ -1.86
HERC4-204ENST00000395198 CLEC12BQ2HXU8 276 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 MIDNQ504T8 468 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 FAM201AQ5SY85 155 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 ZNF626Q68DY1 528 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 C22orf39Q6P5X5 142 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 STAG3L4Q8TBR4 150 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 PBDC1Q9BVG4 233 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 SEC11CQ9BY50 192 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 ATG5Q9H1Y0 275 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 LINC00597Q9H2U6 94 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 PARP11Q9NR21 331 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 SHPKQ9UHJ6 478 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 CYSLTR1Q9Y271 337 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 FLVCR1Q9Y5Y0 555 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 LINC00312Q9Y6C7 94 aa3.44□□□□□ -1.86
HERC4-204ENST00000395198 ICE1Q9Y2F5 2266 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 F5H5P2 479 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 SLC17A2O00624 439 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 EIF4EBP3O60516 100 aaPredicted RBP3.43□□□□□ -1.86
HERC4-204ENST00000395198 CGAP01215 116 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 MT-ATP8P03928 68 aa3.43□□□□□ -1.86
HERC4-204ENST00000395198 CD38P28907 300 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms