RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ACOT6Q3I5F7 207 aaPredicted RBP15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 SSX9Q7RTT3 188 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 TCTEX1D1Q8N7M0 179 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 TPRX1Q8N7U7 411 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 OR5T1Q8NG75 326 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 KLF14Q8TD94 323 aaPredicted RBP15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 DIRC2Q96SL1 478 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 OR6C3Q9NZP0 311 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 METRNQ9UJH8 293 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 MAP1BP46821 2468 aaKnown RBP15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 Q3ZCU0 254 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 ACP7Q6ZNF0 438 aa15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 QTRT1Q9BXR0 403 aaKnown RBP15.28■□□□□ 0.04
PCDHA1-202ENST00000394633 NCOR2Q9Y618 2525 aa15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 ST8SIA5O15466 376 aa15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 CRYAAP02489 173 aa15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 EGR1P18146 543 aa15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 CHRNA7P36544 502 aa15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 ARG2P78540 354 aa15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 GCSAMLQ5JQS6 135 aa15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 CISD2Q8N5K1 135 aaKnown RBP15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 OR13A1Q8NGR1 328 aa15.27■□□□□ 0.04
PCDHA1-202ENST00000394633 CHD8Q9HCK8 2581 aa15.27■□□□□ 0.03
PCDHA1-202ENST00000394633 ZNF891A8MT65 544 aaPredicted RBP15.27■□□□□ 0.03
PCDHA1-202ENST00000394633 BMP5P22003 454 aa15.27■□□□□ 0.03
PCDHA1-202ENST00000394633 GNB1P62873 340 aa15.27■□□□□ 0.03
PCDHA1-202ENST00000394633 PRAMEF6Q5VXH4 476 aa15.27■□□□□ 0.03
PCDHA1-202ENST00000394633 ZNF664Q8N3J9 261 aa15.27■□□□□ 0.03
PCDHA1-202ENST00000394633 PSG11Q9UQ72 335 aa15.27■□□□□ 0.03
PCDHA1-202ENST00000394633 WDR83OSQ9Y284 106 aa15.27■□□□□ 0.03
PCDHA1-202ENST00000394633 TRAV38-1A0A0B4J264 116 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 MARCH11A6NNE9 402 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 DEFB108AA8MXU0 73 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 OR9G9P0C7N8 305 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 CD46P15529 392 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 ATP5G3P48201 142 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 LINC01551Q86U37 167 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 RFESDQ8TAC1 157 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 PRR7Q8TB68 274 aa15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 GMPPAQ96IJ6 420 aaPredicted RBP15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 TET2Q6N021 2002 aaPredicted RBP15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 DSPP15924 2871 aaKnown RBP15.26■□□□□ 0.03
PCDHA1-202ENST00000394633 WISP2O76076 250 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 UBE2G2P60604 165 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 TGFBR3Q03167 851 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 WDR82Q6UXN9 313 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 HSD17B10Q99714 261 aaKnown RBP15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 AURKAIP1Q9NWT8 199 aaPredicted RBP15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 A8MWP6 167 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 GCGP01275 180 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 RNF224P0DH78 156 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 FAM78BQ5VT40 261 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 KCNIP4Q6PIL6 250 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 GCNT2Q8N0V5 402 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 R3HDM4Q96D70 268 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 LURAP1Q96LR2 239 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 DCTN5Q9BTE1 182 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 CXXC4Q9H2H0 198 aa15.25■□□□□ 0.03
PCDHA1-202ENST00000394633 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 IL3RAP26951 378 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 CD1BP29016 333 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 TNFSF10P50591 281 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 FOXF2Q12947 444 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 DERL1Q9BUN8 251 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 PTPRQQ9UMZ3 2332 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 TMPRSS2O15393 492 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 PDE6DO43924 150 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 EDDM3BP56851 147 aa15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 INO80CQ6PI98 192 aaPredicted RBP15.24■□□□□ 0.03
PCDHA1-202ENST00000394633 ZNF705GA8MUZ8 300 aaPredicted RBP15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 AGFG2O95081 481 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 NDUFB4O95168 129 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 SSTP61278 116 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 TMEM249Q2WGJ8 235 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 CST9LP1Q5W188 147 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 RAB1CQ92928 201 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 KCNIP2Q9NS61 270 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 SVILO95425 2214 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 C15orf65H3BRN8 121 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 SLC31A2O15432 143 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 PROP1O75360 226 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 RPL15P61313 204 aaKnown RBP15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 LCN2P80188 198 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 LTC4SQ16873 150 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 TMEM144Q7Z5S9 345 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 WDR31Q8NA23 367 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 ZNF114Q8NC26 417 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 TMEM18Q96B42 140 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 NOL4LQ96MY1 436 aaPredicted RBP15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 ZDHHC11Q9H8X9 412 aa15.23■□□□□ 0.03
PCDHA1-202ENST00000394633 C1QTNF9P0C862 333 aa15.22■□□□□ 0.03
PCDHA1-202ENST00000394633 CD99P14209 185 aa15.22■□□□□ 0.03
PCDHA1-202ENST00000394633 CNN1P51911 297 aaKnown RBP15.22■□□□□ 0.03
PCDHA1-202ENST00000394633 PATZ1Q9HBE1 687 aaKnown RBP15.22■□□□□ 0.03
PCDHA1-202ENST00000394633 FZR1Q9UM11 496 aa15.22■□□□□ 0.03
PCDHA1-202ENST00000394633 PRR14LQ5THK1 2151 aa15.22■□□□□ 0.03
PCDHA1-202ENST00000394633 PGPEP1LA6NFU8 196 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 NDUFB7P17568 137 aa15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 DUTP33316 252 aaKnown RBP15.21■□□□□ 0.03
PCDHA1-202ENST00000394633 AARDQ4LEZ3 155 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms