RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 HIST1H2BCP62807 126 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 NHLH2Q02577 135 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 GNMTQ14749 295 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 ELOBQ15370 118 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 HIST2H2BEQ16778 126 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 COA6Q5JTJ3 125 aaKnown RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 STUMQ69YW2 141 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 SP5Q6BEB4 398 aaPredicted RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 H1FOOQ8IZA3 346 aaPredicted RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 FGFRL1Q8N441 504 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 FAM216BQ8N7L0 139 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 HSD17B11Q8NBQ5 300 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 FAM222BQ8WU58 562 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 HIST1H2BHQ93079 126 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 GALMQ96C23 342 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 RBMXL1Q96E39 390 aaKnown RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 HIST1H2BNQ99877 126 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 HIST1H2BMQ99879 126 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 TMEM204Q9BSN7 226 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 CABLES2Q9BTV7 478 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 NAA60Q9H7X0 242 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 RBM7Q9Y580 266 aaKnown RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 TRBV24-1A0A075B6N3 115 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 IGHV3-43A0A0B4J1X8 118 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 A0A1B0GV90 55 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 A0A1W2PPE2 198 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 ODAMA1E959 279 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 A8MWP6 167 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 TMEM178BH3BS89 294 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 MGST3O14880 152 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 AGPAT2O15120 278 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 MPPED1O15442 326 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 PHF1O43189 567 aaPredicted RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 IGHV3-7P01780 117 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 ARG1P05089 322 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 IGHV3-43DP0DP04 118 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 OMGP23515 440 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 PPP1CCP36873 323 aaKnown RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 NDUFA6P56556 154 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 ZNF266Q14584 549 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 IAH1Q2TAA2 248 aaPredicted RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 TBC1D26Q86UD7 250 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 ZNF808Q8N4W9 903 aaPredicted RBP5.75□□□□□ -1.49
RTN4-205ENST00000394609 OR10V1Q8NGI7 309 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 OR10D4PQ8NGN7 298 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 PPP1R35Q8TAP8 253 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 GAFA1Q96PS6 74 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 TP53RKQ96S44 253 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 TMEM106BQ9NUM4 274 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 GSKIPQ9P0R6 139 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 RNF150Q9ULK6 438 aa5.75□□□□□ -1.49
RTN4-205ENST00000394609 USP9XQ93008 2570 aaPredicted RBP5.74□□□□□ -1.49
RTN4-205ENST00000394609 PPIAL4EA0A075B759 164 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 TRAV1-1A0A0B4J248 108 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 IGHV1-69-2A0A0G2JMI3 117 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 C3orf85A0A1B0GTC6 90 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 A0A1W2PPR1 153 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 SMCO3A2RU48 225 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 RBFOX3A6NFN3 312 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 PPIAL4DF5H284 164 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 H3BQ15 152 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 C15orf65H3BRN8 121 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 TCAPO15273 167 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 KCNAB3O43448 404 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 PGLYRP1O75594 196 aaPredicted RBP5.74□□□□□ -1.49
RTN4-205ENST00000394609 LY6HO94772 140 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 GCGP01275 180 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 IGLV2-14P01704 120 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 HBE1P02100 147 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 MBPP02686 304 aaPredicted RBP5.74□□□□□ -1.49
RTN4-205ENST00000394609 RNF224P0DH78 156 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 PPIAL4FP0DN26 164 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 AKR1C3P42330 323 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 S100A10P60903 97 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 NUTF2P61970 127 aaKnown RBP5.74□□□□□ -1.49
RTN4-205ENST00000394609 TMEM187Q14656 261 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 KHDC3LQ587J8 217 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 ZNF506Q5JVG8 444 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 TEX36Q5VZQ5 186 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 MEX3BQ6ZN04 569 aaKnown RBP5.74□□□□□ -1.49
RTN4-205ENST00000394609 ZNF788Q6ZQV5 615 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 LYZL2Q7Z4W2 148 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 CMTM1Q8IZ96 169 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 ARL6IP6Q8N6S5 226 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 CCDC71LQ8N9Z2 235 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 CD300LFQ8TDQ1 290 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 R3HDM4Q96D70 268 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 TVP23CQ96ET8 276 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 SDSLQ96GA7 329 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 SUCNR1Q9BXA5 334 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 ZNF665Q9H7R5 613 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 KCNS2Q9ULS6 477 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 CBY1Q9Y3M2 126 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 PPIAL4AQ9Y536 164 aa5.74□□□□□ -1.49
RTN4-205ENST00000394609 HRNRQ86YZ3 2850 aaPredicted RBP5.73□□□□□ -1.49
RTN4-205ENST00000394609 TRAV38-1A0A0B4J264 116 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 NPIPB11E5RHQ5 1161 aa5.73□□□□□ -1.49
RTN4-205ENST00000394609 SPINT2O43291 252 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms