RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 SSSCA1O60232 199 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 PDPNQ86YL7 162 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 RHOVQ96L33 236 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 TBX15Q96SF7 602 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 TMEM140Q9NV12 185 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 INSIG2Q9Y5U4 225 aa16.44■□□□□ 0.22
HDDC3-202ENST00000394272 MAP1AP78559 2803 aaPredicted RBP16.43■□□□□ 0.22
HDDC3-202ENST00000394272 A0A096LNT2 108 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 TXNL1O43396 289 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 TOX4O94842 621 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 HRASP01112 189 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 GAPDHP04406 335 aaKnown RBP16.43■□□□□ 0.22
HDDC3-202ENST00000394272 HTR1DP28221 377 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 P2RY1P47900 373 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 AARDQ4LEZ3 155 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 TMEM177Q53S58 311 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 OSR1Q8TAX0 266 aaPredicted RBP16.43■□□□□ 0.22
HDDC3-202ENST00000394272 HSPB7Q9UBY9 170 aa16.43■□□□□ 0.22
HDDC3-202ENST00000394272 TET2Q6N021 2002 aaPredicted RBP16.42■□□□□ 0.22
HDDC3-202ENST00000394272 IGHV1-3A0A0C4DH29 117 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 SRRM4A7MD48 611 aaKnown RBP16.42■□□□□ 0.22
HDDC3-202ENST00000394272 H7C2Y5 167 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 RGS13O14921 159 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 CHST1O43916 411 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 TMEM50AO95807 157 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 USF1P22415 310 aaPredicted RBP16.42■□□□□ 0.22
HDDC3-202ENST00000394272 NUP62P37198 522 aaPredicted RBP16.42■□□□□ 0.22
HDDC3-202ENST00000394272 RPEQ96AT9 228 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 MBD6Q96DN6 1003 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 WASHC3Q9Y3C0 194 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 TNCP24821 2201 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 WRBO00258 174 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 IL6RP08887 468 aaPredicted RBP16.42■□□□□ 0.22
HDDC3-202ENST00000394272 PVALBP20472 110 aaPredicted RBP16.42■□□□□ 0.22
HDDC3-202ENST00000394272 RPL12P30050 165 aaKnown RBP16.42■□□□□ 0.22
HDDC3-202ENST00000394272 MC5RP33032 325 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 RAB13P51153 203 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 PAX8Q06710 450 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 TNFRSF9Q07011 255 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 OR4A47Q6IF82 309 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 OR4C13Q8NGP0 309 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 LHX4Q969G2 390 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 DPM3Q9P2X0 92 aa16.42■□□□□ 0.22
HDDC3-202ENST00000394272 CSMD1Q96PZ7 3565 aa16.41■□□□□ 0.22
HDDC3-202ENST00000394272 LEUTXA8MZ59 168 aa16.41■□□□□ 0.22
HDDC3-202ENST00000394272 BCL2L11O43521 198 aa16.41■□□□□ 0.22
HDDC3-202ENST00000394272 SYNGR2O43760 224 aa16.41■□□□□ 0.22
HDDC3-202ENST00000394272 PAX9P55771 341 aa16.41■□□□□ 0.22
HDDC3-202ENST00000394272 RELBQ01201 579 aa16.41■□□□□ 0.22
HDDC3-202ENST00000394272 TPTE2P1Q5T6R2 138 aa16.41■□□□□ 0.22
HDDC3-202ENST00000394272 FLYWCH2Q96CP2 140 aaKnown RBP16.41■□□□□ 0.22
HDDC3-202ENST00000394272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.4■□□□□ 0.22
HDDC3-202ENST00000394272 A0A1W2PPI3 338 aa16.4■□□□□ 0.22
HDDC3-202ENST00000394272 SHOXO15266 292 aa16.4■□□□□ 0.22
HDDC3-202ENST00000394272 PDZD9Q8IXQ8 264 aa16.4■□□□□ 0.22
HDDC3-202ENST00000394272 HARBI1Q96MB7 349 aa16.4■□□□□ 0.22
HDDC3-202ENST00000394272 RAB40CQ96S21 281 aa16.4■□□□□ 0.22
HDDC3-202ENST00000394272 TRAV3A0A0B4J244 114 aa16.39■□□□□ 0.22
HDDC3-202ENST00000394272 KANTRA0A1W2PQU2 76 aa16.39■□□□□ 0.22
HDDC3-202ENST00000394272 UBE2KP61086 200 aa16.39■□□□□ 0.22
HDDC3-202ENST00000394272 GPR157Q5UAW9 335 aa16.39■□□□□ 0.22
HDDC3-202ENST00000394272 LHFPL4Q7Z7J7 247 aa16.39■□□□□ 0.22
HDDC3-202ENST00000394272 OR2C3Q8N628 320 aa16.39■□□□□ 0.22
HDDC3-202ENST00000394272 C1orf159Q96HA4 380 aa16.39■□□□□ 0.22
HDDC3-202ENST00000394272 AIFM2Q9BRQ8 373 aa16.39■□□□□ 0.22
HDDC3-202ENST00000394272 LYRM2Q9NU23 88 aaPredicted RBP16.39■□□□□ 0.22
HDDC3-202ENST00000394272 CEACAM3P40198 252 aa16.39■□□□□ 0.21
HDDC3-202ENST00000394272 OR2B8PP59922 312 aa16.39■□□□□ 0.21
HDDC3-202ENST00000394272 VAMP2P63027 116 aa16.39■□□□□ 0.21
HDDC3-202ENST00000394272 OR4A16Q8NH70 328 aa16.39■□□□□ 0.21
HDDC3-202ENST00000394272 ARPC5LQ9BPX5 153 aa16.39■□□□□ 0.21
HDDC3-202ENST00000394272 QTRT1Q9BXR0 403 aaKnown RBP16.39■□□□□ 0.21
HDDC3-202ENST00000394272 WSB1Q9Y6I7 421 aa16.39■□□□□ 0.21
HDDC3-202ENST00000394272 IGHV3-72A0A0B4J1Y9 119 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 GPR137BO60478 399 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 RBMXL2O75526 392 aaKnown RBP16.38■□□□□ 0.21
HDDC3-202ENST00000394272 MSMBP08118 114 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 UBE2E1P51965 193 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 MINOS1Q5TGZ0 78 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 TEX261Q6UWH6 196 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 SLC51BQ86UW2 128 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 ZNF429Q86V71 674 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 PUSL1Q8N0Z8 303 aaKnown RBP16.38■□□□□ 0.21
HDDC3-202ENST00000394272 RBKSQ9H477 322 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 BET1LQ9NYM9 111 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 MINOS1-NBL1R4GNA1 71 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 U3KQ87 197 aa16.38■□□□□ 0.21
HDDC3-202ENST00000394272 FASNP49327 2511 aaKnown RBP16.38■□□□□ 0.21
HDDC3-202ENST00000394272 A0A1W2PRD5 423 aa16.37■□□□□ 0.21
HDDC3-202ENST00000394272 A0A1W2PRF3 423 aa16.37■□□□□ 0.21
HDDC3-202ENST00000394272 A0A1W2PRM7 423 aa16.37■□□□□ 0.21
HDDC3-202ENST00000394272 FAM24AA6NFZ4 105 aa16.37■□□□□ 0.21
HDDC3-202ENST00000394272 C15orf61A6NNL5 157 aa16.37■□□□□ 0.21
HDDC3-202ENST00000394272 MED6O75586 246 aa16.37■□□□□ 0.21
HDDC3-202ENST00000394272 SAA1P0DJI8 122 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-202ENST00000394272 PDLIM3Q53GG5 364 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-202ENST00000394272 MOB3BQ86TA1 216 aa16.37■□□□□ 0.21
HDDC3-202ENST00000394272 OR52E5Q8NH55 327 aa16.37■□□□□ 0.21
HDDC3-202ENST00000394272 MS4A7Q9GZW8 240 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-202ENST00000394272 B4DSR2 109 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms