RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MMD2Q8IY49 270 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 KCTD12Q96CX2 325 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 ADAM30Q9UKF2 790 aa13.25□□□□□ -0.29
SNRPA1-202ENST00000394082 IZUMO1RA6ND01 250 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 MPPED1O15442 326 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 TUSC2O75896 110 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 SLC22A5O76082 557 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 ACTL6BO94805 426 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 CTXN2P0C2S0 81 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 GALP22466 123 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 HIPK2Q9H2X6 1198 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 ZNF430Q9H8G1 570 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 GAR1Q9NY12 217 aaKnown RBP13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 SLC2A8Q9NY64 477 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 CEPT1Q9Y6K0 416 aa13.24□□□□□ -0.29
SNRPA1-202ENST00000394082 TALDO1P37837 337 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 DEFA5Q01523 94 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 ZNF45Q02386 682 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 EXOSC2Q13868 293 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 TBCEQ15813 527 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 IDO2Q6ZQW0 420 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 ZNF645Q8N7E2 425 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 ACOT12Q8WYK0 555 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 ZC4H2Q9NQZ6 224 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 ZNF257Q9Y2Q1 563 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 PRELID3BQ9Y3B1 194 aa13.23□□□□□ -0.29
SNRPA1-202ENST00000394082 ZNF785A8K8V0 405 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 LGALS9O00182 355 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 TPPPO94811 219 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 SAA1P0DJI8 122 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 APELAP0DMC3 54 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 CD81P60033 236 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 ARFRP1Q13795 201 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 KLK9Q2XQG4 91 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 CD300EQ496F6 205 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 ADAMTSL5Q6ZMM2 481 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 VSTM2AQ8TAG5 236 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 NEURL2Q9BR09 285 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 CCDC90BQ9GZT6 254 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 DCSTAMPQ9H295 470 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 TECRQ9NZ01 308 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 KLK9Q9UKQ9 250 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 RAB26Q9ULW5 256 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 MRPS7Q9Y2R9 242 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 DMRT1Q9Y5R6 373 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 BIRC6Q9NR09 4857 aa13.22□□□□□ -0.29
SNRPA1-202ENST00000394082 HLA-DQB1P01920 261 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 CD36P16671 472 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 RAB3BP20337 219 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 MYL9P24844 172 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 KIR2DS2P43631 304 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 OR10A3P58181 314 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 DEFB114Q30KQ6 69 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 ZNF367Q7RTV3 350 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 MAFIPQ8WZ33 124 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 OR51E2Q9H255 320 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 Q9H521 79 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 NDUFB11Q9NX14 153 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 BLOC1S6Q9UL45 172 aa13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 RRP15Q9Y3B9 282 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-202ENST00000394082 IGKV1D-8A0A087WSZ0 117 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 TRDV1A0A1B0GX56 115 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 NPIPB5A8MRT5 1133 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 GGCTO75223 188 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 JTBO76095 146 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 MAS1LP35410 378 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 MAP2K4P45985 399 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 C15orf32Q32M92 178 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 KCTD9Q7L273 389 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 GPHB5Q86YW7 130 aa13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 RBMX2Q9Y388 322 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-202ENST00000394082 A0A075B6Q4 140 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 C2orf70A6NJV1 201 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 FCGR3BO75015 233 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 IGLV2-14P01704 120 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 PRH1P02810 166 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 DYNLRB2Q8TF09 96 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 HSD17B10Q99714 261 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 DCUN1D5Q9BTE7 237 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 PLEKHA3Q9HB20 300 aa13.19□□□□□ -0.3
SNRPA1-202ENST00000394082 HYDINQ4G0P3 5121 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 TEX22C9J3V5 150 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 SCGNO76038 276 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 CRYGCP07315 174 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 FOLR2P14207 255 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 EIF4EBP1Q13541 118 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 CDNFQ49AH0 187 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 CNIH2Q6PI25 160 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 OR4S2Q8NH73 311 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 TMEM167AQ8TBQ9 72 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 OR2A7Q96R45 310 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 ATG5Q9H1Y0 275 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 SLC2A9Q9NRM0 540 aa13.18□□□□□ -0.3
SNRPA1-202ENST00000394082 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-202ENST00000394082 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms