RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 GATAD1Q8WUU5 269 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 SRXN1Q9BYN0 137 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 TWSG1Q9GZX9 223 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 MGST3O14880 152 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 RBFOX2O43251 390 aaKnown RBP eCLIP7.3□□□□□ -1.24
GABRA1-202ENST00000393943 C8orf88P0DMB2 117 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 TCL1AP56279 114 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 Q0VG73 95 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 ZNF146Q15072 292 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 RPP25LQ8N5L8 163 aaKnown RBP7.3□□□□□ -1.24
GABRA1-202ENST00000393943 OR52E5Q8NH55 327 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 SARAFQ96BY9 339 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 NRN1Q9NPD7 142 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 ASCL3Q9NQ33 180 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 PEF1Q9UBV8 284 aaKnown RBP7.3□□□□□ -1.24
GABRA1-202ENST00000393943 OBSL1O75147 1896 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 RALGAPA1Q6GYQ0 2036 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 TIMP3P35625 211 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 MRPS11P82912 194 aaKnown RBP7.3□□□□□ -1.24
GABRA1-202ENST00000393943 TFF2Q03403 129 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 MIC13Q5XKP0 118 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 OR4A47Q6IF82 309 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 BCL2L2Q92843 193 aaPredicted RBP7.3□□□□□ -1.24
GABRA1-202ENST00000393943 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 ELOVL5Q9NYP7 299 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 DUSP13Q9UII6 198 aa7.3□□□□□ -1.24
GABRA1-202ENST00000393943 KIAA0100Q14667 2235 aaKnown RBP7.3□□□□□ -1.24
GABRA1-202ENST00000393943 CCL2P13500 99 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 TMEM249Q2WGJ8 235 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 SPINK9Q5DT21 86 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.29□□□□□ -1.24
GABRA1-202ENST00000393943 LRRC29Q8WV35 223 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 GRAMD2BQ96HH9 432 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 RNF115Q9Y4L5 304 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 LOC102723996A0A087X1L8 192 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 IZUMO1RA6ND01 250 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 ZNF324O75467 553 aaPredicted RBP7.29□□□□□ -1.24
GABRA1-202ENST00000393943 CENPWQ5EE01 88 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 C10orf113Q5VZT2 155 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 ACSM6Q6P461 480 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 SCCPDHQ8NBX0 429 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 PRSS3P2Q8NHM4 247 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 SNHG12Q9BXW3 62 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 FANCMQ8IYD8 2048 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 IGKV1-27A0A075B6S5 117 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 TRGV5A0A0B4J1U4 118 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 IFITM10A6NMD0 228 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 EREGO14944 169 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 EFNA2O43921 213 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 NEURL1O76050 574 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 LEPROTL1O95214 131 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 LIPFP07098 398 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 CAMPP49913 170 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 LINC00696Q6ZRV3 163 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 SIT1Q9Y3P8 196 aa7.29□□□□□ -1.24
GABRA1-202ENST00000393943 TRAV9-2A0A087WT02 112 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 H0Y8G0 127 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 ZIC3O60481 467 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 NHLH1Q02575 133 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 ZNF497Q6ZNH5 498 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 RFESDQ8TAC1 157 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 ZNF488Q96MN9 340 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 STAG3L2P0CL84 134 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 STAG3L3P0CL85 134 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 EDN3P14138 238 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 ATP5G3P48201 142 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 YPEL3P61236 119 aaPredicted RBP7.28□□□□□ -1.24
GABRA1-202ENST00000393943 TFF3Q07654 80 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 OR1L8Q8NGR8 309 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 GPHA2Q96T91 129 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 ALKBH7Q9BT30 221 aaPredicted RBP7.28□□□□□ -1.24
GABRA1-202ENST00000393943 VSIRQ9H7M9 311 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 MRPL27Q9P0M9 148 aaKnown RBP7.28□□□□□ -1.24
GABRA1-202ENST00000393943 WNT16Q9UBV4 365 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 TCF19Q9Y242 345 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 ZNF835Q9Y2P0 537 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 LOXL2Q9Y4K0 774 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 KIR2DL5BA0A0G2JN68 375 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 KIR2DL5BA0A0G2JPC4 375 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 hADV38S2A0JD32 116 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 J3QR06 171 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 HLA-DRB1P01911 266 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 IL6RP08887 468 aaPredicted RBP7.28□□□□□ -1.24
GABRA1-202ENST00000393943 COX6A1P12074 109 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 IZUMO4Q1ZYL8 232 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 LRRK1Q38SD2 2015 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 TMEM97Q5BJF2 176 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 RTN4RL2Q86UN3 420 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 KIR2DL5AQ8N109 375 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 LYG1Q8N1E2 194 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 STPG3Q8N7X2 389 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 OR1L1Q8NH94 360 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 KLHDC3Q9BQ90 382 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 NDFIP1Q9BT67 221 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 PAXXQ9BUH6 204 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 LPAR2Q9HBW0 351 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 OR51B2Q9Y5P1 312 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 GAGE10A6NGK3 116 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 LYRM7Q5U5X0 104 aa7.28□□□□□ -1.24
GABRA1-202ENST00000393943 OR52L2PQ8NGH6 319 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms