RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 FAM209BQ5JX69 171 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 SLC16A13Q7RTY0 426 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 C8orf59Q8N0T1 100 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-202ENST00000393773 PACRGLQ8N7B6 248 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 OR56B1Q8NGI3 324 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 OR10J5Q8NHC4 309 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
CHMP3-202ENST00000393773 CCDC140Q96MF4 163 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 SPIN2AQ99865 258 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 SPIN2BQ9BPZ2 258 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 MLXQ9UH92 298 aa11.49□□□□□ -0.57
CHMP3-202ENST00000393773 TEX22C9J3V5 150 aa11.48□□□□□ -0.57
CHMP3-202ENST00000393773 GGCTO75223 188 aaKnown RBP11.48□□□□□ -0.57
CHMP3-202ENST00000393773 CDK1P06493 297 aa11.48□□□□□ -0.57
CHMP3-202ENST00000393773 CBLN1P23435 193 aa11.48□□□□□ -0.57
CHMP3-202ENST00000393773 CLDN12P56749 244 aa11.48□□□□□ -0.57
CHMP3-202ENST00000393773 BPIFB6Q8NFQ5 453 aa11.48□□□□□ -0.57
CHMP3-202ENST00000393773 MAFIPQ8WZ33 124 aa11.48□□□□□ -0.57
CHMP3-202ENST00000393773 ADTRPQ96IZ2 230 aa11.48□□□□□ -0.57
CHMP3-202ENST00000393773 ZNF257Q9Y2Q1 563 aa11.48□□□□□ -0.57
CHMP3-202ENST00000393773 RYR1P21817 5038 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 LOC102724200A0A096LPH7 203 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-202ENST00000393773 A0A0J9YWU9 116 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 CREBL2O60519 120 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-202ENST00000393773 OR2C1O95371 312 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 TPBGQ13641 420 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 TMEM91Q6ZNR0 172 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 WFDC3Q8IUB2 231 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 MMD2Q8IY49 270 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 C8orf4Q9NR00 106 aa11.47□□□□□ -0.57
CHMP3-202ENST00000393773 AK6Q9Y3D8 172 aaKnown RBP11.47□□□□□ -0.57
CHMP3-202ENST00000393773 TMEM272A0A1B0GTI8 110 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 A0A1B0GW64 132 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 HMX3A6NHT5 357 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 MFNGO00587 321 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 ARL3P36405 182 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 TNFRSF9Q07011 255 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 SPHARQ15513 63 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 LIPKQ5VXJ0 399 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 ZNF57Q68EA5 555 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-202ENST00000393773 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 H1FOOQ8IZA3 346 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-202ENST00000393773 RPP25LQ8N5L8 163 aaKnown RBP11.46□□□□□ -0.57
CHMP3-202ENST00000393773 OR52B4Q8NGK2 314 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 FAM3DQ96BQ1 224 aa11.46□□□□□ -0.57
CHMP3-202ENST00000393773 NPIPB5A8MRT5 1133 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 DENRO43583 198 aaKnown RBP11.45□□□□□ -0.58
CHMP3-202ENST00000393773 ACTL6BO94805 426 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 IGHV3-23P01764 117 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 RPS25P62851 125 aaKnown RBP11.45□□□□□ -0.58
CHMP3-202ENST00000393773 KLK9Q2XQG4 91 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 CEMP1Q6PRD7 247 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-202ENST00000393773 BTNL8Q6UX41 500 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 SLC25A42Q86VD7 318 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 UFD1Q92890 307 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 TMEM203Q969S6 136 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 GINS4Q9BRT9 223 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 RBM7Q9Y580 266 aaKnown RBP11.45□□□□□ -0.58
CHMP3-202ENST00000393773 S4R3C0 116 aa11.45□□□□□ -0.58
CHMP3-202ENST00000393773 IGKV1D-8A0A087WSZ0 117 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 E7EUB6 86 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
CHMP3-202ENST00000393773 NDUFB8O95169 186 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 IL6RP08887 468 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-202ENST00000393773 MRPS15P82914 257 aaKnown RBP11.44□□□□□ -0.58
CHMP3-202ENST00000393773 IRF3Q14653 427 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 MED22Q15528 200 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 C2orf76Q3KRA6 126 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 CLEC19AQ6UXS0 136 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 RAB3CQ96E17 227 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 TP53TG1Q9Y2A0 90 aa11.44□□□□□ -0.58
CHMP3-202ENST00000393773 FCGR3BO75015 233 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 KBTBD11O94819 623 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 ZNF735P0CB33 412 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 AREGP15514 252 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 GNB3P16520 340 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 ATF4P18848 351 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-202ENST00000393773 RPL30P62888 115 aaKnown RBP11.43□□□□□ -0.58
CHMP3-202ENST00000393773 DEFB135Q30KP9 77 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 TM4SF20Q53R12 229 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 Q6ZS49 121 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 KCTD9Q7L273 389 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 VKORC1L1Q8N0U8 176 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 ZNF645Q8N7E2 425 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 UXS1Q8NBZ7 420 aa11.43□□□□□ -0.58
CHMP3-202ENST00000393773 DEDDO75618 318 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 ARL6IP5O75915 188 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 IGLV2-14P01704 120 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 CRYGCP07315 174 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 HIST1H1DP16402 221 aaKnown RBP11.42□□□□□ -0.58
CHMP3-202ENST00000393773 CALRP27797 417 aaKnown RBP11.42□□□□□ -0.58
CHMP3-202ENST00000393773 BMI1P35226 326 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 RPL27AP46776 148 aaKnown RBP11.42□□□□□ -0.58
CHMP3-202ENST00000393773 ANKRD55Q3KP44 614 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 OR2B11Q5JQS5 317 aa11.42□□□□□ -0.58
CHMP3-202ENST00000393773 HES5Q5TA89 166 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms