RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SGK494L7N484 410 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 NME2P1O60361 137 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 RAMP3O60896 148 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 WBP4O75554 376 aaKnown RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 RP2O75695 350 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 C1orf105O95561 183 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 IGHG2P01859 326 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 CD3GP09693 182 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 EVI2AP22794 236 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 DEKP35659 375 aaKnown RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 GLRXP35754 106 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 SRP14P37108 136 aaKnown RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 CASP3P42574 277 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 MAGEA5P43359 124 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 PSMD7P51665 324 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC26A5P58743 744 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 RHBDL3P58872 404 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TAS2R45P59539 299 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 HERV-K104P63124 156 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 NUCB2P80303 420 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 RPL19P84098 196 aaKnown RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 NME3Q13232 169 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 GINS1Q14691 196 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 GUCA2BQ16661 112 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TDRG1Q3Y452 100 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR10J3Q5JRS4 329 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 AVPI1Q5T686 147 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 HES5Q5TA89 166 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 MFSD4BQ5TF39 518 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 C11orf71Q6IPW1 123 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 LCN8Q6JVE9 175 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 LCN15Q6UWW0 184 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 ZYG11AQ6WRX3 759 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCDC121Q6ZUS5 278 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 P4HA3Q7Z4N8 544 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 NIT1Q86X76 327 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 MYLK4Q86YV6 388 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 NRMQ8IXM6 262 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 LRRC34Q8IZ02 419 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 GTPBP8Q8N3Z3 284 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 LRRC18Q8N456 261 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 BPIFB2Q8N4F0 458 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMEM75Q8N9X5 138 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMEM161BQ8NDZ6 487 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 PROKR2Q8NFJ6 384 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR2Y1Q8NGV0 311 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR1F12Q8NHA8 337 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR5K2Q8NHB8 316 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC37A2Q8TED4 501 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TCTEX1D2Q8WW35 142 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 APH1BQ8WW43 257 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TESCQ96BS2 214 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 EEF2KMTQ96G04 330 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 SEC22AQ96IW7 307 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 RPRD1AQ96P16 312 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 NIPSNAP1Q9BPW8 284 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 KCNS3Q9BQ31 491 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 NAT9Q9BTE0 207 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TPPP3Q9BW30 176 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 NUDT9Q9BW91 350 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 BLZF1Q9H2G9 400 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 RGCCQ9H4X1 137 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 GLRX2Q9NS18 164 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 PDRG1Q9NUG6 133 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMEM242Q9NWH2 141 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 CYB5R1Q9UHQ9 305 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 BOKQ9UMX3 212 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 GTF2A1LQ9UNN4 478 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 RGPD4Q7Z3J3 1758 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 CAMSAP1Q5T5Y3 1602 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 RGPD1P0DJD0 1748 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 IGHV6-1A0A0B4J1U7 121 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 TRAV41A0A0B4J266 112 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 A0A1B0GU33 70 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 ARHGEF37A1IGU5 675 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 ANXA2P2A6NMY6 339 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMEM14DPA8MWL7 114 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 H3BMQ9 156 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 GOLGA8TH3BQL2 631 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 I3L3M4 83 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 TPST2O60704 377 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 IGHV3-53P01767 116 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 MBP02144 154 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 SFTA3P0C7M3 94 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 SETSIPP0DME0 302 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 HPGDP15428 266 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 PRKACAP17612 351 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 HLA-GP17693 338 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 GALP22466 123 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 MPIP34949 423 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 SULT1A2P50226 295 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 SUPT4H1P63272 117 aaKnown RBP-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 UBE2IP63279 158 aaKnown RBP-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 CETN1Q12798 172 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 APOFQ13790 326 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 RCAN2Q14206 197 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 CRYMQ14894 314 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 GABRA6Q16445 453 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 PPM1LQ5SGD2 360 aa-1.99□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCDC30Q5VVM6 783 aa-1.99□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms