RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 HS3ST6Q96QI5 342 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 IL36RNQ9UBH0 155 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 PROCRQ9UNN8 238 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 A0A0U1RQK1 487 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF320A2RRD8 509 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 HS3ST1O14792 307 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 PAGE4O60829 102 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 LILRA1O75019 489 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 WDR1O75083 606 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 CGAP01215 116 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 ESDP10768 282 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 GNG3P63215 75 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 SPATA46Q5T0L3 261 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 ZBTB34Q8NCN2 500 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 IL1F10Q8WWZ1 152 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 STARD4Q96DR4 205 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 MIEN1Q9BRT3 115 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 TMEM208Q9BTX3 173 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 SCNM1Q9BWG6 230 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 NPCDR1Q9BY65 106 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 PKIBQ9C010 78 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 KCNIP2Q9NS61 270 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 TMEM106BQ9NUM4 274 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 RBM7Q9Y580 266 aaKnown RBP7.48□□□□□ -1.21
GPNMB-202ENST00000381990 IGKV3-15P01624 115 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 RAC2P15153 192 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 RPL29P47914 159 aaKnown RBP7.47□□□□□ -1.21
GPNMB-202ENST00000381990 TPPP2P59282 170 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 SELENOTP62341 195 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 CLEC12BQ2HXU8 276 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 KRTCAP3Q53RY4 240 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 FAM58AQ8N1B3 248 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 CMTM2Q8TAZ6 248 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 OBP2BQ9NPH6 170 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF71Q9NQZ8 489 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-202ENST00000381990 PPP1R3CQ9UQK1 317 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 CFAP47Q6ZTR5 3102 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 ANKRD11Q6UB99 2663 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-202ENST00000381990 KIAA2026Q5HYC2 2103 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 CA6P23280 308 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 CXorf67Q86X51 503 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-202ENST00000381990 SPACA3Q8IXA5 215 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 RDH5Q92781 318 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 TBX15Q96SF7 602 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 OR2J1Q9GZK6 312 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 OPN3Q9H1Y3 402 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-202ENST00000381990 ELOVL5Q9NYP7 299 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 OR1A1Q9P1Q5 309 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 KCNS2Q9ULS6 477 aa7.47□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF705FA8MVS1 300 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-202ENST00000381990 SYNGR1O43759 233 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 YPEL1O60688 119 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF705DP0CH99 300 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF705BP0CI00 300 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF16P17020 682 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-202ENST00000381990 CHRNA7P36544 502 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 CDC34P49427 236 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-202ENST00000381990 NHLH1Q02575 133 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 C1orf185Q5T7R7 199 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 SLC25A40Q8TBP6 338 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 SFRP2Q96HF1 295 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 YPEL2Q96QA6 119 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-202ENST00000381990 FAM215AQ9Y5M1 114 aa7.46□□□□□ -1.21
GPNMB-202ENST00000381990 LRRC30A6NM36 301 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 PMS2P5A8MQ11 134 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 HMGB3O15347 200 aaKnown RBP7.46□□□□□ -1.22
GPNMB-202ENST00000381990 AGFG2O95081 481 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 KRASP01116 189 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 P0C879 139 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 SELEP16581 610 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 GCH1P30793 250 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 ZNF705AQ6ZN79 300 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-202ENST00000381990 Q8IYB0 196 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 TMEM256Q8N2U0 113 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 PIP4P2Q8N4L2 257 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 TCTEX1D1Q8N7M0 179 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 SGMS2Q8NHU3 365 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 ABHD17AQ96GS6 310 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 RTL8AQ9BWD3 113 aa7.46□□□□□ -1.22
GPNMB-202ENST00000381990 MAP1BP46821 2468 aaKnown RBP7.46□□□□□ -1.22
GPNMB-202ENST00000381990 ESPL1Q14674 2120 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 MDFIC2A0A1B0GVS7 189 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 IQCF6A8MYZ5 107 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 J3QT63 122 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 NPPCP23582 126 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 TIMP3P35625 211 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 ZNF497Q6ZNH5 498 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 BHLHA15Q7RTS1 189 aaPredicted RBP7.45□□□□□ -1.22
GPNMB-202ENST00000381990 DRAM1Q8N682 238 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 GATAD1Q8WUU5 269 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 SDSLQ96GA7 329 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 TUBG2Q9NRH3 451 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 MBNL3Q9NUK0 354 aaKnown RBP7.45□□□□□ -1.22
GPNMB-202ENST00000381990 MGAQ8IWI9 3026 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 CEP295Q9C0D2 2601 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms