RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 OR9G9P0C7N8 305 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 RRASP10301 218 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 CD37P11049 281 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 RANBP1P43487 201 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 TMBIM6P55061 237 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 SSBP2P81877 361 aaPredicted RBP12.12□□□□□ -0.47
VCX3A-201ENST00000381089 QRFPP83859 136 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 DEFA5Q01523 94 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 SPCS2Q15005 226 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 VMA21Q3ZAQ7 101 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 FAM209BQ5JX69 171 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 IDNKQ5T6J7 187 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
VCX3A-201ENST00000381089 FAM223AQ8IWN6 122 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 FAM3DQ96BQ1 224 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 LPAR5Q9H1C0 372 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 DCSTAMPQ9H295 470 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 ADAM30Q9UKF2 790 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 ALMS1Q8TCU4 4167 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 A0A0A6YYD4 124 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 MSGN1A6NI15 193 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 CREBL2O60519 120 aaPredicted RBP12.11□□□□□ -0.47
VCX3A-201ENST00000381089 CRYGBP07316 175 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
VCX3A-201ENST00000381089 ATP5G2Q06055 141 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 PLA2G7Q13093 441 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 CD300EQ496F6 205 aaPredicted RBP12.11□□□□□ -0.47
VCX3A-201ENST00000381089 OR4A4PQ8NGN8 299 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 LGALS14Q8TCE9 139 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 OR2D2Q9H210 308 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 SRD5A3Q9H8P0 318 aa12.11□□□□□ -0.47
VCX3A-201ENST00000381089 TMEM272A0A1B0GTI8 110 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 OR11H12B2RN74 326 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 H3BMQ9 156 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 ACTL6BO94805 426 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 APELAP0DMC3 54 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 RHOGP84095 191 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
VCX3A-201ENST00000381089 TNXAQ16473 311 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 GUCA2BQ16661 112 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 C2orf76Q3KRA6 126 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 TMEM177Q53S58 311 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 FAM89BQ8N5H3 189 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 DEFB125Q8N687 156 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
VCX3A-201ENST00000381089 OR10J5Q8NHC4 309 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 KCTD12Q96CX2 325 aaKnown RBP12.1□□□□□ -0.47
VCX3A-201ENST00000381089 RBM38Q9H0Z9 239 aaKnown RBP12.1□□□□□ -0.47
VCX3A-201ENST00000381089 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
VCX3A-201ENST00000381089 RBM7Q9Y580 266 aaKnown RBP12.1□□□□□ -0.47
VCX3A-201ENST00000381089 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 BET1O15155 118 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 UBE2KP61086 200 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 OR56B1Q8NGI3 324 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
VCX3A-201ENST00000381089 ACOT12Q8WYK0 555 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 SLC25A46Q96AG3 418 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 ADTRPQ96IZ2 230 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 PECRQ9BY49 303 aa12.09□□□□□ -0.47
VCX3A-201ENST00000381089 TECRQ9NZ01 308 aaKnown RBP12.09□□□□□ -0.47
VCX3A-201ENST00000381089 RSL24D1Q9UHA3 163 aaKnown RBP12.09□□□□□ -0.47
VCX3A-201ENST00000381089 DPPA5A6NC42 116 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 RBMY1BA6NDE4 496 aaKnown RBP12.08□□□□□ -0.48
VCX3A-201ENST00000381089 RBMY1EA6NEQ0 496 aaKnown RBP12.08□□□□□ -0.48
VCX3A-201ENST00000381089 BMPR1BO00238 502 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 FABP7O15540 132 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 CD7P09564 240 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 CD3GP09693 182 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 RBMY1DP0C7P1 496 aaKnown RBP12.08□□□□□ -0.48
VCX3A-201ENST00000381089 PRSS8Q16651 343 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 OR5H6Q8NGV6 325 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 SPIN2AQ99865 258 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 SPIN2BQ9BPZ2 258 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 AKIP1Q9NQ31 210 aa12.08□□□□□ -0.48
VCX3A-201ENST00000381089 ZNF230Q9UIE0 474 aaPredicted RBP12.08□□□□□ -0.48
VCX3A-201ENST00000381089 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.07□□□□□ -0.48
VCX3A-201ENST00000381089 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 ZNF785A8K8V0 405 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 DIRAS3O95661 229 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 TMEM50BP56557 158 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 DEFB114Q30KQ6 69 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 SLC25A42Q86VD7 318 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 CROCCP3Q8IVE0 287 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 NECAP1Q8NC96 275 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 GINS4Q9BRT9 223 aa12.07□□□□□ -0.48
VCX3A-201ENST00000381089 SRRM4A7MD48 611 aaKnown RBP12.06□□□□□ -0.48
VCX3A-201ENST00000381089 FOXI3A8MTJ6 420 aaPredicted RBP12.06□□□□□ -0.48
VCX3A-201ENST00000381089 CRYZL1O95825 349 aa12.06□□□□□ -0.48
VCX3A-201ENST00000381089 FOLR2P14207 255 aa12.06□□□□□ -0.48
VCX3A-201ENST00000381089 KIR2DS2P43631 304 aa12.06□□□□□ -0.48
VCX3A-201ENST00000381089 RORCP51449 518 aa12.06□□□□□ -0.48
VCX3A-201ENST00000381089 OSR1Q8TAX0 266 aaPredicted RBP12.06□□□□□ -0.48
VCX3A-201ENST00000381089 LINC00476Q8WZB0 136 aa12.06□□□□□ -0.48
VCX3A-201ENST00000381089 DCUN1D5Q9BTE7 237 aa12.06□□□□□ -0.48
VCX3A-201ENST00000381089 CABLES2Q9BTV7 478 aa12.06□□□□□ -0.48
VCX3A-201ENST00000381089 ZC4H2Q9NQZ6 224 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms