RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 FAM53AQ6NSI3 398 aaPredicted RBP10.46□□□□□ -0.73
PUDP-201ENST00000381077 TGIF2LYQ8IUE0 185 aa10.46□□□□□ -0.73
PUDP-201ENST00000381077 Q8N7P7 452 aa10.46□□□□□ -0.73
PUDP-201ENST00000381077 RBMXL3Q8N7X1 1067 aaKnown RBP10.46□□□□□ -0.73
PUDP-201ENST00000381077 BTF3L4Q96K17 158 aa10.46□□□□□ -0.73
PUDP-201ENST00000381077 FAM210BQ96KR6 192 aa10.46□□□□□ -0.73
PUDP-201ENST00000381077 SSX3Q99909 188 aa10.46□□□□□ -0.73
PUDP-201ENST00000381077 SMIM7Q9BQ49 75 aa10.46□□□□□ -0.73
PUDP-201ENST00000381077 C15orf61A6NNL5 157 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 PRSS46E5RG02 174 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 HRASP01112 189 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 EDDM3BP56851 147 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 TNFAIP6P98066 277 aaPredicted RBP10.46□□□□□ -0.74
PUDP-201ENST00000381077 ZNF674Q2M3X9 581 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.74
PUDP-201ENST00000381077 PYGO2Q9BRQ0 406 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 DCTN5Q9BTE1 182 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 SLC25A22Q9H936 323 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 CHODLQ9H9P2 273 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 GCM1Q9NP62 436 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 TMEM140Q9NV12 185 aa10.46□□□□□ -0.74
PUDP-201ENST00000381077 F6UZH7 168 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 SPRY3O43610 288 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 GFRA3O60609 400 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 CXCL1P09341 107 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 IRF2P14316 349 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 TNFRSF1AP19438 455 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 CD40P25942 277 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 TFF3Q07654 80 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 FAM180AQ6UWF9 173 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 TMEM108Q6UXF1 575 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 ZNF788Q6ZQV5 615 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 ZNRF1Q8ND25 227 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 IDI2-AS1Q9NZ38 188 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 ZNF257Q9Y2Q1 563 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 ZNF318Q5VUA4 2279 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 CACNA1DQ01668 2161 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 IFNA10P01566 189 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 IGHV1-46P01743 117 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 TFF1P04155 84 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 CD99P14209 185 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 ZNF134P52741 427 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 BSXQ3C1V8 233 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 ZNF439Q8NDP4 499 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 NANPQ8TBE9 248 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 NPVFQ9HCQ7 196 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 HEYLQ9NQ87 328 aaPredicted RBP10.45□□□□□ -0.74
PUDP-201ENST00000381077 TMEM14BQ9NUH8 114 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 TCF19Q9Y242 345 aa10.45□□□□□ -0.74
PUDP-201ENST00000381077 S100PP25815 95 aa10.44□□□□□ -0.74
PUDP-201ENST00000381077 HSPE1P61604 102 aaKnown RBP10.44□□□□□ -0.74
PUDP-201ENST00000381077 HOXA4Q00056 320 aaPredicted RBP10.44□□□□□ -0.74
PUDP-201ENST00000381077 MEF2CQ06413 473 aaPredicted RBP10.44□□□□□ -0.74
PUDP-201ENST00000381077 GAFA1Q96PS6 74 aa10.44□□□□□ -0.74
PUDP-201ENST00000381077 TMEM204Q9BSN7 226 aa10.44□□□□□ -0.74
PUDP-201ENST00000381077 PRNDQ9UKY0 176 aa10.44□□□□□ -0.74
PUDP-201ENST00000381077 IGHV3OR15-7A0A075B7D8 119 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 A0A1W2PPV4 95 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 hADV38S2A0JD32 116 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 MKRN2OSH3BPM6 223 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 TMPRSS2O15393 492 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 IL6RP08887 468 aaPredicted RBP10.43□□□□□ -0.74
PUDP-201ENST00000381077 CTAG1AP78358 180 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 SSX2Q16385 188 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 LTC4SQ16873 150 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 CT45A1Q5HYN5 189 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 DNLZQ5SXM8 178 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 ZNF343Q6P1L6 599 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 TREML4Q6UXN2 200 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 CT45A3Q8NHU0 189 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 PARLQ9H300 379 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 SRD5A3Q9H8P0 318 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 FKBP11Q9NYL4 201 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 DOK5Q9P104 306 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 LSM4Q9Y4Z0 139 aaKnown RBP10.43□□□□□ -0.74
PUDP-201ENST00000381077 LINC00312Q9Y6C7 94 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 ARL2-SNX15V9GYD0 113 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 DSCAML1Q8TD84 2053 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 BDP1A6H8Y1 2624 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 TGIF2-C20orf24A0A0A6YYL0 155 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 NKX6-3A6NJ46 265 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 RPL23P62829 140 aaKnown RBP10.43□□□□□ -0.74
PUDP-201ENST00000381077 MRPS11P82912 194 aaKnown RBP10.43□□□□□ -0.74
PUDP-201ENST00000381077 RAB31Q13636 194 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 RPL39P5Q59GN2 51 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 SLC25A48Q6ZT89 311 aaKnown RBP10.43□□□□□ -0.74
PUDP-201ENST00000381077 CISD2Q8N5K1 135 aaKnown RBP10.43□□□□□ -0.74
PUDP-201ENST00000381077 OR5B12Q96R08 314 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 ENY2Q9NPA8 101 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 RPUSD1Q9UJJ7 312 aaKnown RBP10.43□□□□□ -0.74
PUDP-201ENST00000381077 TANC2Q9HCD6 1990 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 CACNA1HO95180 2353 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 WDFY4Q6ZS81 3184 aa10.43□□□□□ -0.74
PUDP-201ENST00000381077 SAA2-SAA4A0A096LPE2 208 aa10.42□□□□□ -0.74
PUDP-201ENST00000381077 PRRG2O14669 202 aa10.42□□□□□ -0.74
PUDP-201ENST00000381077 PFN1P07737 140 aaKnown RBP10.42□□□□□ -0.74
PUDP-201ENST00000381077 SAA2P0DJI9 122 aaPredicted RBP10.42□□□□□ -0.74
PUDP-201ENST00000381077 SRP14P37108 136 aaKnown RBP10.42□□□□□ -0.74
PUDP-201ENST00000381077 TLE1Q04724 770 aa10.42□□□□□ -0.74
PUDP-201ENST00000381077 FAM71F2Q6NXP2 309 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms