RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 POU2AF1Q16633 256 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 SPNS3Q6ZMD2 512 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 OR10C1Q96KK4 312 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 RHOVQ96L33 236 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 RANBP3Q9H6Z4 567 aaPredicted RBP16.45■□□□□ 0.22
TSSC4-203ENST00000380996 ABCA1O95477 2261 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 A0A0U1RQK1 487 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 A0A1B0GU03 582 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 MPTX1A8MV57 137 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 FSHBP01225 129 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 FBP1P09467 338 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 RAP2BP61225 183 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 SRSF4Q08170 494 aaKnown RBP16.45■□□□□ 0.22
TSSC4-203ENST00000380996 GPR146Q96CH1 333 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 ST6GAL2Q96JF0 529 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 NMES1Q9C002 83 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 MEGF9Q9H1U4 602 aa16.45■□□□□ 0.22
TSSC4-203ENST00000380996 RANGRFQ9HD47 186 aaPredicted RBP16.45■□□□□ 0.22
TSSC4-203ENST00000380996 MOSP00540 346 aa16.44■□□□□ 0.22
TSSC4-203ENST00000380996 KRTAP1-1Q07627 177 aa16.44■□□□□ 0.22
TSSC4-203ENST00000380996 SSX9Q7RTT3 188 aa16.44■□□□□ 0.22
TSSC4-203ENST00000380996 OR2T10Q8NGZ9 312 aa16.44■□□□□ 0.22
TSSC4-203ENST00000380996 VSTM2AQ8TAG5 236 aa16.44■□□□□ 0.22
TSSC4-203ENST00000380996 TSNAXQ99598 290 aaKnown RBP16.44■□□□□ 0.22
TSSC4-203ENST00000380996 GSKIPQ9P0R6 139 aa16.44■□□□□ 0.22
TSSC4-203ENST00000380996 FAM90A9PA6NNJ1 464 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 P0C879 139 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 FAM106CPP0CH98 169 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 PAX6P26367 422 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 SMCO1Q147U7 214 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 THNSL2Q86YJ6 484 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 ZBTB8BQ8NAP8 495 aaPredicted RBP16.43■□□□□ 0.22
TSSC4-203ENST00000380996 YAE1D1Q9NRH1 226 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 TMEM140Q9NV12 185 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 MYO9AB2RTY4 2548 aa16.43■□□□□ 0.22
TSSC4-203ENST00000380996 A0A0G2JRQ6 117 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 IGKV1D-33P01593 117 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 IGKV1-33P01594 117 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 DYNLT3P51808 116 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 HES1Q14469 280 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 VMA21Q3ZAQ7 101 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 TCTE3Q8IZS6 198 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 VKORC1L1Q8N0U8 176 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 COA4Q9NYJ1 87 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 CACNG5Q9UF02 275 aa16.42■□□□□ 0.22
TSSC4-203ENST00000380996 AKAP9Q99996 3911 aa16.41■□□□□ 0.22
TSSC4-203ENST00000380996 SRRM4A7MD48 611 aaKnown RBP16.41■□□□□ 0.22
TSSC4-203ENST00000380996 SNRNP70P08621 437 aaKnown RBP16.41■□□□□ 0.22
TSSC4-203ENST00000380996 EBI3Q14213 229 aa16.41■□□□□ 0.22
TSSC4-203ENST00000380996 OR4A47Q6IF82 309 aa16.41■□□□□ 0.22
TSSC4-203ENST00000380996 C9orf139Q6ZV77 190 aa16.41■□□□□ 0.22
TSSC4-203ENST00000380996 OR1S1Q8NH92 325 aa16.41■□□□□ 0.22
TSSC4-203ENST00000380996 FYTTD1Q96QD9 318 aaKnown RBP16.41■□□□□ 0.22
TSSC4-203ENST00000380996 FLNAP21333 2647 aaKnown RBP16.41■□□□□ 0.22
TSSC4-203ENST00000380996 RBMXL2O75526 392 aaKnown RBP16.4■□□□□ 0.22
TSSC4-203ENST00000380996 SNAPC5O75971 98 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 FOSL1P15407 271 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 UBE2KP61086 200 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 OR2T35Q8NGX2 323 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 OR4A16Q8NH70 328 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 EAF1Q96JC9 268 aaPredicted RBP16.4■□□□□ 0.22
TSSC4-203ENST00000380996 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.4■□□□□ 0.22
TSSC4-203ENST00000380996 ZFP57Q9NU63 452 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 BET1LQ9NYM9 111 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 CACFD1Q9UGQ2 172 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 SPDEFO95238 335 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 SAA1P0DJI8 122 aaPredicted RBP16.4■□□□□ 0.22
TSSC4-203ENST00000380996 HNF1AP20823 631 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 FGL1Q08830 312 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 AANATQ16613 207 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 IZUMO4Q1ZYL8 232 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 FAM120AOSQ5T036 256 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 Q6ZRM9 215 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 OR4A5Q8NH83 315 aa16.4■□□□□ 0.22
TSSC4-203ENST00000380996 RBMXL1Q96E39 390 aaKnown RBP16.4■□□□□ 0.22
TSSC4-203ENST00000380996 IGLV2-23P01705 113 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 CD99P14209 185 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 TMEM11P17152 192 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 CD24P25063 80 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 IL15RAQ13261 267 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 HNF4GQ14541 408 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 LRRC75BQ2VPJ9 315 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 PUSL1Q8N0Z8 303 aaKnown RBP16.39■□□□□ 0.21
TSSC4-203ENST00000380996 TEX45Q8NA69 505 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 OR4D5Q8NGN0 318 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 PPP1R1CQ8WVI7 109 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 RITA1Q96K30 269 aa16.39■□□□□ 0.21
TSSC4-203ENST00000380996 ZANQ9Y493 2812 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 CSPG4Q6UVK1 2322 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 PITX3O75364 302 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 IL6RP08887 468 aaPredicted RBP16.38■□□□□ 0.21
TSSC4-203ENST00000380996 OR9G9P0C7N8 305 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 PSMB6P28072 239 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 SRP14P37108 136 aaKnown RBP16.38■□□□□ 0.21
TSSC4-203ENST00000380996 NKX2-1P43699 371 aaPredicted RBP16.38■□□□□ 0.21
TSSC4-203ENST00000380996 PSG5Q15238 335 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 MMDQ15546 238 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 OR8H1Q8NGG4 311 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 PPP1R14BQ96C90 147 aa16.38■□□□□ 0.21
TSSC4-203ENST00000380996 WDR89Q96FK6 387 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms