RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PPP5D1E7EU14 171 aa17.45■□□□□ 0.38
U2AF1-202ENST00000380276 RBMY1DP0C7P1 496 aaKnown RBP17.45■□□□□ 0.38
U2AF1-202ENST00000380276 SAA1P0DJI8 122 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-202ENST00000380276 PSMA1P25786 263 aaKnown RBP17.45■□□□□ 0.38
U2AF1-202ENST00000380276 OR2B11Q5JQS5 317 aa17.45■□□□□ 0.38
U2AF1-202ENST00000380276 C10orf55Q5SWW7 151 aa17.45■□□□□ 0.38
U2AF1-202ENST00000380276 OSR1Q8TAX0 266 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-202ENST00000380276 SPIN2AQ99865 258 aa17.45■□□□□ 0.38
U2AF1-202ENST00000380276 SPIN2BQ9BPZ2 258 aa17.45■□□□□ 0.38
U2AF1-202ENST00000380276 ZNF430Q9H8G1 570 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-202ENST00000380276 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.44■□□□□ 0.38
U2AF1-202ENST00000380276 FCGR3BO75015 233 aa17.44■□□□□ 0.38
U2AF1-202ENST00000380276 HLA-AP01891 365 aaKnown RBP17.44■□□□□ 0.38
U2AF1-202ENST00000380276 EDN2P20800 178 aa17.44■□□□□ 0.38
U2AF1-202ENST00000380276 FABP5Q01469 135 aa17.44■□□□□ 0.38
U2AF1-202ENST00000380276 IRF3Q14653 427 aa17.44■□□□□ 0.38
U2AF1-202ENST00000380276 CDK10Q15131 360 aa17.44■□□□□ 0.38
U2AF1-202ENST00000380276 OR10R2Q8NGX6 335 aa17.44■□□□□ 0.38
U2AF1-202ENST00000380276 DDB2Q92466 427 aa17.44■□□□□ 0.38
U2AF1-202ENST00000380276 KCTD12Q96CX2 325 aaKnown RBP17.44■□□□□ 0.38
U2AF1-202ENST00000380276 TPRKBQ9Y3C4 175 aa17.44■□□□□ 0.38
U2AF1-202ENST00000380276 DPPA5A6NC42 116 aa17.43■□□□□ 0.38
U2AF1-202ENST00000380276 FOLR2P14207 255 aa17.43■□□□□ 0.38
U2AF1-202ENST00000380276 PSMD7P51665 324 aa17.43■□□□□ 0.38
U2AF1-202ENST00000380276 DEFB114Q30KQ6 69 aa17.43■□□□□ 0.38
U2AF1-202ENST00000380276 C15orf32Q32M92 178 aa17.43■□□□□ 0.38
U2AF1-202ENST00000380276 MMD2Q8IY49 270 aa17.43■□□□□ 0.38
U2AF1-202ENST00000380276 NECAP1Q8NC96 275 aa17.43■□□□□ 0.38
U2AF1-202ENST00000380276 WDR89Q96FK6 387 aaPredicted RBP17.43■□□□□ 0.38
U2AF1-202ENST00000380276 TRBV9A0A0B4J1U6 114 aa17.42■□□□□ 0.38
U2AF1-202ENST00000380276 C2orf70A6NJV1 201 aa17.42■□□□□ 0.38
U2AF1-202ENST00000380276 MFNGO00587 321 aa17.42■□□□□ 0.38
U2AF1-202ENST00000380276 CASQ2O14958 399 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-202ENST00000380276 DIRAS3O95661 229 aa17.42■□□□□ 0.38
U2AF1-202ENST00000380276 IGHV3-23P01764 117 aa17.42■□□□□ 0.38
U2AF1-202ENST00000380276 HIST1H1DP16402 221 aaKnown RBP17.42■□□□□ 0.38
U2AF1-202ENST00000380276 KCTD9Q7L273 389 aa17.42■□□□□ 0.38
U2AF1-202ENST00000380276 SLC25A42Q86VD7 318 aa17.42■□□□□ 0.38
U2AF1-202ENST00000380276 H1FOOQ8IZA3 346 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-202ENST00000380276 TTC9CQ8N5M4 171 aa17.42■□□□□ 0.38
U2AF1-202ENST00000380276 HMX3A6NHT5 357 aa17.41■□□□□ 0.38
U2AF1-202ENST00000380276 RGS10O43665 173 aa17.41■□□□□ 0.38
U2AF1-202ENST00000380276 GGCTO75223 188 aaKnown RBP17.41■□□□□ 0.38
U2AF1-202ENST00000380276 OR2C1O95371 312 aa17.41■□□□□ 0.38
U2AF1-202ENST00000380276 MLLT11Q13015 90 aaPredicted RBP17.41■□□□□ 0.38
U2AF1-202ENST00000380276 SLC16A13Q7RTY0 426 aa17.41■□□□□ 0.38
U2AF1-202ENST00000380276 FBXL7Q9UJT9 491 aa17.41■□□□□ 0.38
U2AF1-202ENST00000380276 PRELID3BQ9Y3B1 194 aa17.41■□□□□ 0.38
U2AF1-202ENST00000380276 PDCD5O14737 125 aa17.4■□□□□ 0.38
U2AF1-202ENST00000380276 KIR2DS2P43631 304 aa17.4■□□□□ 0.38
U2AF1-202ENST00000380276 OR10A3P58181 314 aa17.4■□□□□ 0.38
U2AF1-202ENST00000380276 C19orf35Q6ZS72 473 aa17.4■□□□□ 0.38
U2AF1-202ENST00000380276 ZNF645Q8N7E2 425 aa17.4■□□□□ 0.38
U2AF1-202ENST00000380276 CACNG8Q8WXS5 425 aa17.4■□□□□ 0.38
U2AF1-202ENST00000380276 FYTTD1Q96QD9 318 aaKnown RBP17.4■□□□□ 0.38
U2AF1-202ENST00000380276 TECRQ9NZ01 308 aaKnown RBP17.4■□□□□ 0.38
U2AF1-202ENST00000380276 MRPS7Q9Y2R9 242 aaKnown RBP17.4■□□□□ 0.38
U2AF1-202ENST00000380276 S4R3C0 116 aa17.4■□□□□ 0.38
U2AF1-202ENST00000380276 PLECQ15149 4684 aaKnown RBP17.39■□□□□ 0.37
U2AF1-202ENST00000380276 ERICH4A6NGS2 130 aa17.39■□□□□ 0.37
U2AF1-202ENST00000380276 FAM209BQ5JX69 171 aa17.39■□□□□ 0.37
U2AF1-202ENST00000380276 VKORC1L1Q8N0U8 176 aa17.39■□□□□ 0.37
U2AF1-202ENST00000380276 MGLLQ99685 303 aa17.39■□□□□ 0.37
U2AF1-202ENST00000380276 CENPOQ9BU64 300 aa17.39■□□□□ 0.37
U2AF1-202ENST00000380276 ACOT13Q9NPJ3 140 aa17.39■□□□□ 0.37
U2AF1-202ENST00000380276 IGKV1D-8A0A087WSZ0 117 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 ZNF320A2RRD8 509 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 METTL21EPA6NDL7 271 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 CD36P16671 472 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 MYL9P24844 172 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 ARL3P36405 182 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 MAP2K4P45985 399 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 CLEC19AQ6UXS0 136 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 ST6GALNAC5Q9BVH7 336 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 ATG5Q9H1Y0 275 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 OR51E2Q9H255 320 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 ZC4H2Q9NQZ6 224 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 ZNF257Q9Y2Q1 563 aa17.38■□□□□ 0.37
U2AF1-202ENST00000380276 RAB27BO00194 218 aa17.37■□□□□ 0.37
U2AF1-202ENST00000380276 NFYAP23511 347 aaPredicted RBP17.37■□□□□ 0.37
U2AF1-202ENST00000380276 RPL27AP46776 148 aaKnown RBP17.37■□□□□ 0.37
U2AF1-202ENST00000380276 ZNF57Q68EA5 555 aaPredicted RBP17.37■□□□□ 0.37
U2AF1-202ENST00000380276 OR52B4Q8NGK2 314 aa17.37■□□□□ 0.37
U2AF1-202ENST00000380276 ELF5Q9UKW6 265 aaPredicted RBP17.37■□□□□ 0.37
U2AF1-202ENST00000380276 SCAF4O95104 1147 aaKnown RBP17.36■□□□□ 0.37
U2AF1-202ENST00000380276 RAB6AP20340 208 aa17.36■□□□□ 0.37
U2AF1-202ENST00000380276 CBLN1P23435 193 aa17.36■□□□□ 0.37
U2AF1-202ENST00000380276 CRHBPP24387 322 aa17.36■□□□□ 0.37
U2AF1-202ENST00000380276 RPL30P62888 115 aaKnown RBP17.36■□□□□ 0.37
U2AF1-202ENST00000380276 PMS2P11Q13670 270 aa17.36■□□□□ 0.37
U2AF1-202ENST00000380276 TCTEX1D2Q8WW35 142 aa17.36■□□□□ 0.37
U2AF1-202ENST00000380276 RBMX2Q9Y388 322 aaKnown RBP17.36■□□□□ 0.37
U2AF1-202ENST00000380276 IFITM5A6NNB3 132 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 TEX22C9J3V5 150 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 LGALS9O00182 355 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 NDUFB8O95169 186 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 AQP4P55087 323 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 FAM106AQ4KMX7 169 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 TMEM61Q8N0U2 210 aa17.35■□□□□ 0.37
U2AF1-202ENST00000380276 OR4S2Q8NH73 311 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms