RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 SPCS3P61009 180 aa12.55□□□□□ -0.4
RAB3IP-204ENST00000378815 ZNF429Q86V71 674 aa12.55□□□□□ -0.4
RAB3IP-204ENST00000378815 ZNF525Q8N782 197 aa12.55□□□□□ -0.4
RAB3IP-204ENST00000378815 TMEM186Q96B77 213 aa12.55□□□□□ -0.4
RAB3IP-204ENST00000378815 GNPNAT1Q96EK6 184 aaPredicted RBP12.55□□□□□ -0.4
RAB3IP-204ENST00000378815 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-204ENST00000378815 CACFD1Q9UGQ2 172 aa12.55□□□□□ -0.4
RAB3IP-204ENST00000378815 USP24Q9UPU5 2620 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 A0A1W2PPH5 198 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 IFNA17P01571 189 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 CDKN1AP38936 164 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 BTNL8Q6UX41 500 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 Q6ZRG5 221 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 LY6G5BQ8NDX9 201 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 OR13D1Q8NGV5 346 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 LYPD6BQ8NI32 183 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 LINC00052Q96N35 136 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 HRH4Q9H3N8 390 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 STRAPQ9Y3F4 350 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 LRBAP50851 2863 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 PPIAL4CA0A0B4J2A2 164 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 KRBOX1C9JBD0 128 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 LY86O95711 162 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 IL6RP08887 468 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 PPIAL4GP0DN37 164 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 UQCC3Q6UW78 93 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 IL34Q6ZMJ4 242 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 RFNGQ9Y644 331 aa12.54□□□□□ -0.4
RAB3IP-204ENST00000378815 C15orf61A6NNL5 157 aa12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 PMS2P5A8MQ11 134 aa12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 H0YJW9 148 aa12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 F12P00748 615 aaPredicted RBP12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 IFNA5P01569 189 aa12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 TMEM182Q6ZP80 229 aaPredicted RBP12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 TNFRSF14Q92956 283 aa12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 PATZ1Q9HBE1 687 aaKnown RBP12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 TMEM14BQ9NUH8 114 aa12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 FOXA2Q9Y261 457 aaPredicted RBP12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 MALRD1Q5VYJ5 2156 aa12.53□□□□□ -0.4
RAB3IP-204ENST00000378815 C1QL1O75973 258 aa12.52□□□□□ -0.4
RAB3IP-204ENST00000378815 FHITP49789 147 aa12.52□□□□□ -0.4
RAB3IP-204ENST00000378815 F2RL1P55085 397 aa12.52□□□□□ -0.4
RAB3IP-204ENST00000378815 RUNX1Q01196 453 aa12.52□□□□□ -0.4
RAB3IP-204ENST00000378815 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.4
RAB3IP-204ENST00000378815 PJVKQ0ZLH3 352 aa12.52□□□□□ -0.4
RAB3IP-204ENST00000378815 DIAPH2-AS1Q14236 149 aa12.52□□□□□ -0.4
RAB3IP-204ENST00000378815 IGHV2-26A0A0B4J1V2 119 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 SRRM4A7MD48 611 aaKnown RBP12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 C22orf46C9J442 243 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 UMAD1C9J7I0 102 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 TRIM77I1YAP6 450 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 APOA2P02652 100 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 ARG1P05089 322 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 REG1BP48304 166 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 LILRB2Q8N423 598 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 BBC3Q96PG8 261 aaPredicted RBP12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 NABP2Q9BQ15 211 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 PARD6GQ9BYG4 376 aaPredicted RBP12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 CACNA1BQ00975 2339 aa12.52□□□□□ -0.41
RAB3IP-204ENST00000378815 SHOXO15266 292 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 NDUFS7O75251 213 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 VDAC2P45880 294 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 OR8G2PQ6IF36 304 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 OSR1Q8TAX0 266 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 NUP50Q9UKX7 468 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 IGLV1-47P01700 117 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 PRH1P02810 166 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 CAMLGP49069 296 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 EFNA4P52798 201 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 GNB2P62879 340 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 LRRC75BQ2VPJ9 315 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 AIFM2Q9BRQ8 373 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 PCGF1Q9BSM1 259 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 TCF19Q9Y242 345 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 DCHS2Q6V1P9 2916 aa12.51□□□□□ -0.41
RAB3IP-204ENST00000378815 GOSR1O95249 250 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 PRB1P04280 392 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 LIPFP07098 398 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 OR8U8P0C7N1 319 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 IL3RAP26951 378 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 TMEM177Q53S58 311 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 SLC25A24Q6NUK1 477 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 THNSL2Q86YJ6 484 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 CCDC28AQ8IWP9 274 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 BPIFCQ8NFQ6 507 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 SCGB1C1Q8TD33 95 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 H7C2Y5 167 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 UPK2O00526 184 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 DLX1P56177 255 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 HSPE1P61604 102 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 ATP6V1FQ16864 119 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 TUSC1Q2TAM9 212 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 HLA-DRB5Q30154 266 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms