RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 FGF7P21781 194 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 C1orf229Q6ZS94 237 aaPredicted RBP16.68■□□□□ 0.26
VSX1-202ENST00000376709 SSX7Q7RTT5 188 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 LYG1Q8N1E2 194 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 MBD3L1Q8WWY6 194 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 HIST1H2BAQ96A08 127 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 SAP30LQ9HAJ7 183 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 IDI2-AS1Q9NZ38 188 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 GAB2Q9UQC2 676 aa16.68■□□□□ 0.26
VSX1-202ENST00000376709 GNG10P50151 68 aa16.67■□□□□ 0.26
VSX1-202ENST00000376709 TLE1Q04724 770 aa16.67■□□□□ 0.26
VSX1-202ENST00000376709 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.67■□□□□ 0.26
VSX1-202ENST00000376709 VSTM5A8MXK1 200 aa16.67■□□□□ 0.26
VSX1-202ENST00000376709 ATXN7O15265 892 aaPredicted RBP16.67■□□□□ 0.26
VSX1-202ENST00000376709 DDB2Q92466 427 aa16.67■□□□□ 0.26
VSX1-202ENST00000376709 WFIKKN1Q96NZ8 548 aa16.67■□□□□ 0.26
VSX1-202ENST00000376709 EGLN1Q9GZT9 426 aa16.67■□□□□ 0.26
VSX1-202ENST00000376709 NGBQ9NPG2 151 aa16.67■□□□□ 0.26
VSX1-202ENST00000376709 TMEM140Q9NV12 185 aa16.67■□□□□ 0.26
VSX1-202ENST00000376709 LOC102723971A0A1B0GUV8 181 aa16.66■□□□□ 0.26
VSX1-202ENST00000376709 A0A1W2PPH5 198 aa16.66■□□□□ 0.26
VSX1-202ENST00000376709 MAP1LC3B2A6NCE7 125 aa16.66■□□□□ 0.26
VSX1-202ENST00000376709 SPCS3P61009 180 aa16.66■□□□□ 0.26
VSX1-202ENST00000376709 MRPS11P82912 194 aaKnown RBP16.66■□□□□ 0.26
VSX1-202ENST00000376709 AARDQ4LEZ3 155 aa16.66■□□□□ 0.26
VSX1-202ENST00000376709 MAP1LC3BQ9GZQ8 125 aa16.66■□□□□ 0.26
VSX1-202ENST00000376709 TRAV38-1A0A0B4J264 116 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 A0A1W2PPE2 198 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 hADV38S2A0JD32 116 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 H3BQ15 152 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 NDUFA2O43678 99 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 ARG1P05089 322 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 GNB2P62879 340 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 CENPVQ7Z7K6 275 aaPredicted RBP16.65■□□□□ 0.26
VSX1-202ENST00000376709 SPTA1P02549 2419 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 TRGV8A0A0C4DH27 118 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 C15orf62A8K5M9 175 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 LY86O95711 162 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 BCL2P10415 239 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 THBS3P49746 956 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 RPP30P78346 268 aaKnown RBP16.65■□□□□ 0.26
VSX1-202ENST00000376709 TFF3Q07654 80 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 C1orf87Q8N0U7 546 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 ZNF709Q8N972 641 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 HEYLQ9NQ87 328 aaPredicted RBP16.65■□□□□ 0.26
VSX1-202ENST00000376709 SLC39A9Q9NUM3 307 aa16.65■□□□□ 0.26
VSX1-202ENST00000376709 SLC25A10Q9UBX3 287 aaPredicted RBP16.65■□□□□ 0.26
VSX1-202ENST00000376709 IFNA10P01566 189 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 RELBQ01201 579 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 ACSM6Q6P461 480 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 ZNF429Q86V71 674 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 RPP25LQ8N5L8 163 aaKnown RBP16.64■□□□□ 0.25
VSX1-202ENST00000376709 ZNF439Q8NDP4 499 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 CORO2AQ92828 525 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 NPCDR1Q9BY65 106 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 TUBA4BQ9H853 241 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 TRAV3A0A0B4J244 114 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 MMP23AO75900 390 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 FOLR2P14207 255 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 VWC2Q2TAL6 325 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 TMEM30BQ3MIR4 351 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 OR52E5Q8NH55 327 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 CCL17Q92583 94 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 RHOVQ96L33 236 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 VKORC1Q9BQB6 163 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 ZNF251Q9BRH9 671 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 NIPSNAP3BQ9BS92 247 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 LINC00574Q9H8X3 128 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 CISD1Q9NZ45 108 aaKnown RBP16.64■□□□□ 0.25
VSX1-202ENST00000376709 LINC00312Q9Y6C7 94 aa16.64■□□□□ 0.25
VSX1-202ENST00000376709 IGKV1D-33P01593 117 aa16.63■□□□□ 0.25
VSX1-202ENST00000376709 IGKV1-33P01594 117 aa16.63■□□□□ 0.25
VSX1-202ENST00000376709 MBP02144 154 aa16.63■□□□□ 0.25
VSX1-202ENST00000376709 LHX4Q969G2 390 aa16.63■□□□□ 0.25
VSX1-202ENST00000376709 ADTRPQ96IZ2 230 aa16.63■□□□□ 0.25
VSX1-202ENST00000376709 RPUSD1Q9UJJ7 312 aaKnown RBP16.63■□□□□ 0.25
VSX1-202ENST00000376709 EIF3GO75821 320 aaKnown RBP eCLIP16.62■□□□□ 0.25
VSX1-202ENST00000376709 HABP2Q14520 560 aaPredicted RBP16.62■□□□□ 0.25
VSX1-202ENST00000376709 FFAR4Q5NUL3 377 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 ZNF383Q8NA42 475 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 PKDREJQ9NTG1 2253 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 TET2Q6N021 2002 aaPredicted RBP16.62■□□□□ 0.25
VSX1-202ENST00000376709 PPIAL4EA0A075B759 164 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 C17orf112F2Z3M2 114 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 PPIAL4DF5H284 164 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 IFNA1P01562 189 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 MT-ND4LP03901 98 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 PPIAL4FP0DN26 164 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 RAB11AP62491 216 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 RPL31P62899 125 aaKnown RBP16.62■□□□□ 0.25
VSX1-202ENST00000376709 FAM24BQ8N5W8 94 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 OR10G4Q8NGN3 311 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 OR10G9Q8NGN4 311 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 OR10G7Q8NGN6 311 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 RAB39BQ96DA2 213 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 GAL3ST2Q9H3Q3 398 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 DYNLRB1Q9NP97 96 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 BIN3Q9NQY0 253 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 PPIAL4AQ9Y536 164 aa16.62■□□□□ 0.25
VSX1-202ENST00000376709 KLF2Q9Y5W3 355 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms