RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 UBALD2Q8IYN6 164 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 TBX15Q96SF7 602 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 NPCDR1Q9BY65 106 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 HRASP01112 189 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 TXN2Q99757 166 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 CLCF1Q9UBD9 225 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 PXMP4Q9Y6I8 212 aa12.09□□□□□ -0.47
TNFRSF1B-201ENST00000376259 HOXA6P31267 233 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PRDX2P32119 198 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CAMPP49913 170 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CNN1P51911 297 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 OR5I1Q13606 314 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 LHFPL4Q7Z7J7 247 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 C1QL4Q86Z23 238 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 OR10G8Q8NGN5 311 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SPAARA0A1B0GVQ0 90 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TCAPO15273 167 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 HIST1H1BP16401 226 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PAX5Q02548 391 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ZCCHC24Q8N2G6 241 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A10PA6NDY2 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A18PA6NE21 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A16PA6NEW6 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A20PA6NIJ5 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A8PA6NJQ4 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A7PA6NKC0 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A22PA8MWA6 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A12PA8MX19 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A5PA8MXJ8 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A23PA8MXZ1 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SNURFLB1AK76 121 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A15PP0C7V4 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A13PP0C7W8 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A14PP0C7W9 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FAM90A24PP0C7X0 464 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 COL8A2P25067 703 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 RPL19P84098 196 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ZNF645Q8N7E2 425 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 DECR2Q9NUI1 292 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 RNF115Q9Y4L5 304 aa12.08□□□□□ -0.48
TNFRSF1B-201ENST00000376259 H3BTX0 84 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 DKK1O94907 266 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CRISP2P16562 243 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 FOXL2NBQ6ZUU3 175 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SCO2A0A1W2PP80 73 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 RRHO14718 337 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SMPD2O60906 423 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 AMBPP02760 352 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CD81P60033 236 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CCL8P80075 99 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ATOH7Q8N100 152 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CMTM2Q8TAZ6 248 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 IQCJQ1A5X6 159 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TIGITQ495A1 244 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 DOLPP1Q86YN1 238 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 WFDC8Q8IUA0 241 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TMEM256Q8N2U0 113 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CTDSP1Q9GZU7 261 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
TNFRSF1B-201ENST00000376259 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 PAX6P26367 422 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 AMTP48728 403 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CASP6P55212 293 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 C21orf62-AS1Q17RA5 79 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 RNFT1Q5M7Z0 435 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ASCL4Q6XD76 172 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 OR8I2Q8N0Y5 310 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ZNF439Q8NDP4 499 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 DEFB124Q8NES8 71 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 HSPB9Q9BQS6 159 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TRAV3A0A0B4J244 114 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 B4E171 279 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TMPRSS2O15393 492 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 ZNF25P17030 456 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 IGHV1-2P23083 117 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TSPAN7P41732 249 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 GNB1P62873 340 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 NTN3O00634 580 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CYP2G1PQ6ZSU1 146 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SIGLECL1Q8N7X8 197 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 GTF3AQ92664 365 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CXXC4Q9H2H0 198 aa12.06□□□□□ -0.48
TNFRSF1B-201ENST00000376259 IGHV3-72A0A0B4J1Y9 119 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 LINC00473A8K010 186 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 MRPS11P82912 194 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 WDR86Q86TI4 376 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 MISP3Q96FF7 219 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 OR2V2Q96R30 315 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 CCL13Q99616 98 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SSBP3Q9BWW4 388 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SRD5A3Q9H8P0 318 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 WISP2O76076 250 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 TMEM183AQ8IXX5 376 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 SAXO1Q8IYX7 474 aa12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 RBMXL3Q8N7X1 1067 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1B-201ENST00000376259 LYPD6BQ8NI32 183 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms