RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 IGKV1-6A0A0C4DH72 117 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 SRRM4A7MD48 611 aaKnown RBP10.6□□□□□ -0.71
PTCH1-202ENST00000375271 RBMXL2O75526 392 aaKnown RBP10.6□□□□□ -0.71
PTCH1-202ENST00000375271 SAA1P0DJI8 122 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-202ENST00000375271 DEFA4P12838 97 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 GADD45AP24522 165 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 ZNF45Q02386 682 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 CLEC19AQ6UXS0 136 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 LYG2Q86SG7 212 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 TTC9CQ8N5M4 171 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 OR1L6Q8NGR2 347 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 VSTM2AQ8TAG5 236 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 CACNG8Q8WXS5 425 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 EEF1AKMT3Q96AZ1 226 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 ZNF430Q9H8G1 570 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-202ENST00000375271 C8orf4Q9NR00 106 aa10.6□□□□□ -0.71
PTCH1-202ENST00000375271 SLC17A2O00624 439 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 DENRO43583 198 aaKnown RBP10.59□□□□□ -0.71
PTCH1-202ENST00000375271 SPRY2O43597 315 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 ARL6IP5O75915 188 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 IGHV3-23P01764 117 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 CD36P16671 472 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 QRFPP83859 136 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 TM4SF20Q53R12 229 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 IGSF11Q5DX21 431 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 BTNL8Q6UX41 500 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 KCTD9Q7L273 389 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 GPHB5Q86YW7 130 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 FAM89BQ8N5H3 189 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 NANOGP1Q8N7R0 232 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 UXS1Q8NBZ7 420 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 UFD1Q92890 307 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 RAB3CQ96E17 227 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 FYTTD1Q96QD9 318 aaKnown RBP10.59□□□□□ -0.71
PTCH1-202ENST00000375271 CABLES2Q9BTV7 478 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 PSORS1C1Q9UIG5 152 aa10.59□□□□□ -0.71
PTCH1-202ENST00000375271 A0A075B6Q4 140 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 FCGR3BO75015 233 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 DIRAS3O95661 229 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 FCGR3AP08637 254 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 DUTP33316 252 aaKnown RBP10.58□□□□□ -0.72
PTCH1-202ENST00000375271 TNFRSF9Q07011 255 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 ARFRP1Q13795 201 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 C10orf55Q5SWW7 151 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 STPG3Q8N7X2 389 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 MARC2Q969Z3 335 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 TP53TG1Q9Y2A0 90 aa10.58□□□□□ -0.72
PTCH1-202ENST00000375271 TRBV6-7A0A0A0MS04 114 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 TRAV25A0A0B4J276 109 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 UBE2CO00762 179 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 UCHL1P09936 223 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 HIST1H1BP16401 226 aaKnown RBP10.57□□□□□ -0.72
PTCH1-202ENST00000375271 EDN2P20800 178 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 RPL27AP46776 148 aaKnown RBP10.57□□□□□ -0.72
PTCH1-202ENST00000375271 OR2B11Q5JQS5 317 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 Q6ZWC4 215 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 RPP25LQ8N5L8 163 aaKnown RBP10.57□□□□□ -0.72
PTCH1-202ENST00000375271 OR2C3Q8N628 320 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 TMEM203Q969S6 136 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 FAM3DQ96BQ1 224 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 C6orf62Q9GZU0 229 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-202ENST00000375271 MLXQ9UH92 298 aa10.57□□□□□ -0.72
PTCH1-202ENST00000375271 AK6Q9Y3D8 172 aaKnown RBP10.57□□□□□ -0.72
PTCH1-202ENST00000375271 HMX3A6NHT5 357 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 NPIPB5A8MRT5 1133 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 A8MWP6 167 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 J3QRK9 145 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 CDK1P06493 297 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 MYOD1P15172 320 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 CRHBPP24387 322 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 PSMD7P51665 324 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 TMEM50BP56557 158 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 CLDN12P56749 244 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 SPHARQ15513 63 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 TRAM1Q15629 374 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 WFDC3Q8IUB2 231 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 PACRGLQ8N7B6 248 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 OR4S2Q8NH73 311 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 MAFIPQ8WZ33 124 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 CXorf58Q96LI9 332 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 OR51E2Q9H255 320 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 RAB22AQ9UL26 194 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 UFC1Q9Y3C8 167 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 S4R3C0 116 aa10.56□□□□□ -0.72
PTCH1-202ENST00000375271 TRBV7-1A0A0A6YYK4 115 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 TMEM213A2RRL7 107 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 LINC00473A8K010 186 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 CYB5BO43169 146 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 SLC22A5O76082 557 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 KBTBD11O94819 623 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 HSMCR30P0CW71 290 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 MAS1LP35410 378 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 ZNF585BQ52M93 769 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 PLAC9Q5JTB6 97 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 LIPKQ5VXJ0 399 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 LAMTOR1Q6IAA8 161 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 ZNF645Q8N7E2 425 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 OR2A7Q96R45 310 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 PLCXD1Q9NUJ7 323 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms