RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 KCNS2Q9ULS6 477 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 FZR1Q9UM11 496 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 SSUH2Q9Y2M2 353 aa6.89□□□□□ -1.31
UBR4-202ENST00000375224 CAMLGP49069 296 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 BAXQ07812 192 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 ASCL5Q7RTU5 278 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 GBGT1Q8N5D6 347 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 OR10W1Q8NGF6 305 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 LRRC29Q8WV35 223 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 ERGIC1Q969X5 290 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 C11orf1Q9H5F2 150 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 DUSP13Q9UII6 198 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 RIF1Q5UIP0 2472 aaKnown RBP6.88□□□□□ -1.31
UBR4-202ENST00000375224 IGHV3-64DA0A0J9YX35 117 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 WNT9BO14905 357 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 PSPNO60542 156 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 HTD2P86397 168 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 EWSR1Q01844 656 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBR4-202ENST00000375224 MIDNQ504T8 468 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 TCTEX1D1Q8N7M0 179 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 OR51H1Q8NH63 302 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 ABHD5Q8WTS1 349 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 CHODLQ9H9P2 273 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 ELOVL5Q9NYP7 299 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 KIR2DL5BA0A0G2JN68 375 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 KIR2DL5BA0A0G2JPC4 375 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 SRRM5B3KS81 715 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 K7EM74 188 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 PSG2P11465 335 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 GABRA2P47869 451 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 COL10A1Q03692 680 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 TOMM20LQ6UXN7 152 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 MRGPRGQ86SM5 289 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 KIR2DL5AQ8N109 375 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 ZNF645Q8N7E2 425 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 VAMP8Q9BV40 100 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 PARP12Q9H0J9 701 aaKnown RBP6.88□□□□□ -1.31
UBR4-202ENST00000375224 MEGF9Q9H1U4 602 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 STRAPQ9Y3F4 350 aaKnown RBP6.88□□□□□ -1.31
UBR4-202ENST00000375224 SVILO95425 2214 aa6.88□□□□□ -1.31
UBR4-202ENST00000375224 TRAV39A0A0B4J263 110 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 C3orf80F5H4A9 247 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 SSSCA1O60232 199 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 PITX3O75364 302 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 BMP5P22003 454 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 PRDX2P32119 198 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 CEBPDP49716 269 aaPredicted RBP6.87□□□□□ -1.31
UBR4-202ENST00000375224 RPL23AP62750 156 aaKnown RBP6.87□□□□□ -1.31
UBR4-202ENST00000375224 AESQ08117 197 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 CATR1Q13166 79 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 TMEM241Q24JQ0 296 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 BTNL8Q6UX41 500 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 STXBP6Q8NFX7 210 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
UBR4-202ENST00000375224 RAB40CQ96S21 281 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 RAB9BQ9NP90 201 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 PPP1R3CQ9UQK1 317 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 IGLV3-9A0A075B6K5 115 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 C12orf77C9JDV5 145 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 SPINT2O43291 252 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 HBZP02008 142 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 ADH4P08319 380 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 FOXC1Q12948 553 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 GPR146Q96CH1 333 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 NIPSNAP3BQ9BS92 247 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 PAM16Q9Y3D7 125 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 ARID1AO14497 2285 aa6.87□□□□□ -1.31
UBR4-202ENST00000375224 A0A1B0GV50 99 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 TNFSF4P23510 183 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 ID4P47928 161 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 CXorf66Q5JRM2 361 aaPredicted RBP6.86□□□□□ -1.31
UBR4-202ENST00000375224 RPRMLQ8N4K4 120 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 DRAM1Q8N682 238 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 TMEM252Q8N6L7 170 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 OR1L1Q8NH94 360 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 COQ2Q96H96 371 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 GPHA2Q96T91 129 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 POLR3KQ9Y2Y1 108 aaPredicted RBP6.86□□□□□ -1.31
UBR4-202ENST00000375224 YLPM1P49750 1951 aaKnown RBP6.86□□□□□ -1.31
UBR4-202ENST00000375224 ZNF292O60281 2723 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 FAM24AA6NFZ4 105 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 TOX4O94842 621 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 IGLV2-14P01704 120 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 SPACA3Q8IXA5 215 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 SDSLQ96GA7 329 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 MS4A10Q96PG2 267 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 BET1LQ9NYM9 111 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 LOC105371242A0A075B767 164 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 FAM90A26D6RGX4 464 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 MGST3O14880 152 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 CHST1O43916 411 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 RBMXL2O75526 392 aaKnown RBP6.86□□□□□ -1.31
UBR4-202ENST00000375224 MT-CO2P00403 227 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 DANCRP0C864 163 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 GATA4P43694 442 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 ODF1Q14990 250 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 TPTE2P1Q5T6R2 138 aa6.86□□□□□ -1.31
UBR4-202ENST00000375224 GFRALQ6UXV0 394 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms