RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SP1P08047 785 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 CD46P15529 392 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 RAB4AP20338 218 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 CATR1Q13166 79 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 ZNF645Q8N7E2 425 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 OR52L2PQ8NGH6 319 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 ZCCHC14Q8WYQ9 949 aaKnown RBP9.28□□□□□ -0.92
CCDC40-203ENST00000374877 IGKV3D-15A0A087WSY6 115 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 RBFOX2O43251 390 aaKnown RBP eCLIP9.27□□□□□ -0.92
CCDC40-203ENST00000374877 SELEP16581 610 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 KITLGP21583 273 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 LINC00205P59089 165 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 BATFQ16520 125 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 TMEM144Q7Z5S9 345 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 SFRP2Q96HF1 295 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 IMMP2LQ96T52 175 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 DKK4Q9UBT3 224 aa9.27□□□□□ -0.92
CCDC40-203ENST00000374877 RIF1Q5UIP0 2472 aaKnown RBP9.27□□□□□ -0.93
CCDC40-203ENST00000374877 BTF3P20290 206 aaKnown RBP9.27□□□□□ -0.93
CCDC40-203ENST00000374877 THBS3P49746 956 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 SCCPDHQ8NBX0 429 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 BTF3L4Q96K17 158 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 CIB3Q96Q77 187 aaPredicted RBP9.27□□□□□ -0.93
CCDC40-203ENST00000374877 RTL8AQ9BWD3 113 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 ELOVL5Q9NYP7 299 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 FAM166BA8MTA8 275 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 KLRC4-KLRK1H3BQV0 150 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 WDR86Q86TI4 376 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 NINJ1Q92982 152 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 GALMQ96C23 342 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 C5orf30Q96GV9 206 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 SCNM1Q9BWG6 230 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 C12orf49Q9H741 205 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 PAM16Q9Y3D7 125 aa9.27□□□□□ -0.93
CCDC40-203ENST00000374877 A0A1B0GWJ7 208 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 SH2D1BO14796 132 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 GRPP07492 148 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 CD99P14209 185 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 CBLN1P23435 193 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 C3AR1Q16581 482 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 TDRG1Q3Y452 100 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 ZNF703Q9H7S9 590 aaPredicted RBP9.26□□□□□ -0.93
CCDC40-203ENST00000374877 MBNL3Q9NUK0 354 aaKnown RBP9.26□□□□□ -0.93
CCDC40-203ENST00000374877 TMPRSS2O15393 492 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 ARG2P78540 354 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 FOXL1Q12952 345 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 DEFB109BQ30KR1 87 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 TMEM178AQ8NBL3 297 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 TMEM106BQ9NUM4 274 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 POLDIP2Q9Y2S7 368 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 DOCK10Q96BY6 2186 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 C12orf77C9JDV5 145 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 KLK10O43240 276 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 RPLP1P05386 114 aaKnown RBP9.26□□□□□ -0.93
CCDC40-203ENST00000374877 LHX2P50458 406 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 CCL11P51671 97 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 ZNF90Q03938 601 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 HES7Q9BYE0 225 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 KCNIP2Q9NS61 270 aa9.26□□□□□ -0.93
CCDC40-203ENST00000374877 TRBV20OR9-2A0A075B6H5 130 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 IRF2P14316 349 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 CD1BP29016 333 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 TPPP2P59282 170 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 HOXA4Q00056 320 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-203ENST00000374877 Q6ZWC4 215 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 FDCSPQ8NFU4 85 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 HSPB9Q9BQS6 159 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 TMEM208Q9BTX3 173 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 IGHV3-43A0A0B4J1X8 118 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 SCO2A0A1W2PP80 73 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 PSPNO60542 156 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 P0C879 139 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 IGHV3-43DP0DP04 118 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 TNFSF10P50591 281 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 AESQ08117 197 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 OR10G8Q8NGN5 311 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 R3HDM4Q96D70 268 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 TTTY12Q9BZ98 90 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 WIPI2Q9Y4P8 454 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 CLDN14O95500 239 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 HAND1O96004 215 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 CRISP2P16562 243 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 MEOX1P50221 254 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 CLDN18P56856 261 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 BRWD1-AS2P59051 145 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 ZNF766Q5HY98 468 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 CXorf67Q86X51 503 aaPredicted RBP9.25□□□□□ -0.93
CCDC40-203ENST00000374877 Q8IYB0 196 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 MRGPRDQ8TDS7 321 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 VN1R17PQ8TDU5 208 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 SAMD10Q9BYL1 202 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 GOLT1BQ9Y3E0 138 aa9.25□□□□□ -0.93
CCDC40-203ENST00000374877 TMEM30CPA0ZSE6 113 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 C15orf62A8K5M9 175 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 DEFB108AA8MXU0 73 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 RAB29O14966 203 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 SERF1AO75920 110 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 HBZP02008 142 aa9.24□□□□□ -0.93
CCDC40-203ENST00000374877 TFF1P04155 84 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms