RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 EEF1E1-BLOC1S5C9J1V9 151 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 TMEM178BH3BS89 294 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 EEF1E1O43324 174 aaKnown RBP6.61□□□□□ -1.35
USP48-203ENST00000374732 CD5LO43866 347 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 GPR183P32249 361 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 LCN6P62502 163 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 SP6Q3SY56 376 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 MPV17L2Q567V2 206 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 C17orf64Q86WR6 236 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 SLC25A40Q8TBP6 338 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 STARD4Q96DR4 205 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 DCBLD2Q96PD2 775 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 SLAMF8Q9P0V8 285 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 NEUROG3Q9Y4Z2 214 aa6.61□□□□□ -1.35
USP48-203ENST00000374732 ADIRFQ15847 76 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 PHLDA2Q53GA4 152 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 ZNF695Q8IW36 515 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 OR4C3Q8NH37 302 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 ZNF665Q9H7R5 613 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 CES1P1Q9UKY3 287 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 CENPFP49454 3210 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 RBFOX3A6NFN3 312 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 MDKP21741 143 aaPredicted RBP6.6□□□□□ -1.35
USP48-203ENST00000374732 RPL38P63173 70 aaKnown RBP6.6□□□□□ -1.35
USP48-203ENST00000374732 Q5XG85 94 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 ZNF880Q6PDB4 577 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 IGFL2Q6UWQ7 119 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 RAB42Q8N4Z0 105 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 OR2M3Q8NG83 312 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 OR5D14Q8NGL3 314 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 LINC01587Q99440 93 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 CXXC4Q9H2H0 198 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 MTFP1Q9UDX5 166 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 ATG2BQ96BY7 2078 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 PIKFYVEQ9Y2I7 2098 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 FAM220BPB1ANY3 271 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 C1QL1O75973 258 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 IBA57Q5T440 356 aaKnown RBP6.6□□□□□ -1.35
USP48-203ENST00000374732 DTWD1Q8N5C7 304 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 TPRX1Q8N7U7 411 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 MBD3L2Q8NHZ7 208 aaPredicted RBP6.6□□□□□ -1.35
USP48-203ENST00000374732 TMEM133Q9H2Q1 129 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 LINC00312Q9Y6C7 94 aa6.6□□□□□ -1.35
USP48-203ENST00000374732 ZFC3H1O60293 1989 aaKnown RBP6.6□□□□□ -1.35
USP48-203ENST00000374732 MUC21A0A140T8X8 626 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 VCYO14598 125 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 CXCL13O43927 109 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 NGFP01138 241 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 IFITM1P13164 125 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 ZNF134P52741 427 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 LY6DQ14210 128 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 MUC21Q5SSG8 566 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 TEX36Q5VZQ5 186 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 COX18Q8N8Q8 333 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 NUS1Q96E22 293 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 SOSTQ9BQB4 213 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 VKORC1Q9BQB6 163 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 CCL16O15467 120 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 FCGR3AP08637 254 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 NTF4P34130 210 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 C1orf174Q8IYL3 243 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 OR1L1Q8NH94 360 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 C20orf78Q9BR46 151 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 CDH20Q9HBT6 801 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 TMEM74BQ9NUR3 256 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 PILRAQ9UKJ1 303 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 CCL26Q9Y258 94 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 MED31Q9Y3C7 131 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 OR1A2Q9Y585 309 aa6.59□□□□□ -1.35
USP48-203ENST00000374732 NAP1L6A6NFF2 107 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 RER1O15258 196 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 PRDX4Q13162 271 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 MPV17LQ2QL34 196 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 UBE2NLQ5JXB2 153 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 FRG2Q64ET8 278 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 CD164L2Q6UWJ8 174 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 SHISA6Q6ZSJ9 500 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 TRPT1Q86TN4 253 aaKnown RBP6.58□□□□□ -1.36
USP48-203ENST00000374732 MSRB3Q8IXL7 192 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 FRG2BQ96QU4 278 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 FOXC2Q99958 501 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 FZR1Q9UM11 496 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 ZNF835Q9Y2P0 537 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 NUP210Q8TEM1 1887 aaPredicted RBP6.58□□□□□ -1.36
USP48-203ENST00000374732 CNTFRP26992 372 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 S100A3P33764 101 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 MTPNP58546 118 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 KLRD1Q13241 179 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 DUSP5Q16690 384 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 ACSF3Q4G176 576 aaPredicted RBP6.58□□□□□ -1.36
USP48-203ENST00000374732 SPANXN4Q5MJ08 99 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 ZNF626Q68DY1 528 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 GDPGP1Q6ZNW5 385 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 PRR22Q8IZ63 422 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 OR4F17Q8NGA8 305 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 OR51T1Q8NGJ9 327 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 ZNF502Q8TBZ5 544 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 LIN37Q96GY3 246 aaPredicted RBP6.58□□□□□ -1.36
USP48-203ENST00000374732 OR4F4Q96R69 305 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms