RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 IQCF2Q8IXL9 164 aa14.97□□□□□ -0.01
CD40-201ENST00000372276 DCTN5Q9BTE1 182 aa14.97□□□□□ -0.01
CD40-201ENST00000372276 SEC14L6B5MCN3 397 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 PRRG2O14669 202 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 HRASP01112 189 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 TNFRSF1AP19438 455 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 CD40P25942 277 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 FGF8P55075 233 aaPredicted RBP14.96□□□□□ -0.01
CD40-201ENST00000372276 TMEM241Q24JQ0 296 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 ACSM6Q6P461 480 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 CYP2G1PQ6ZSU1 146 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 C1orf87Q8N0U7 546 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 DDB2Q92466 427 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 ZDHHC16Q969W1 377 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 GCM1Q9NP62 436 aa14.96□□□□□ -0.01
CD40-201ENST00000372276 KLK10O43240 276 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 PROP1O75360 226 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 KBTBD11O94819 623 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 IFNA10P01566 189 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 TFF1P04155 84 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 CD55P08174 381 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 OR9G9P0C7N8 305 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 FOXC1Q12948 553 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 POU2AF1Q16633 256 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 LTC4SQ16873 150 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 TEX36Q5VZQ5 186 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 WDR25Q64LD2 544 aaPredicted RBP14.95□□□□□ -0.02
CD40-201ENST00000372276 FAM53AQ6NSI3 398 aaPredicted RBP14.95□□□□□ -0.02
CD40-201ENST00000372276 ZNRF1Q8ND25 227 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 HEYLQ9NQ87 328 aaPredicted RBP14.95□□□□□ -0.02
CD40-201ENST00000372276 IGHV3OR15-7A0A075B7D8 119 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 FNDC10F2Z333 226 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 IGHV1-46P01743 117 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 OPRK1P41145 380 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 VDAC2P45880 294 aaPredicted RBP14.95□□□□□ -0.02
CD40-201ENST00000372276 RELBQ01201 579 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 C17orf58Q2M2W7 97 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 VHLLQ6RSH7 139 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 SSX7Q7RTT5 188 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 IDI2-AS1Q9NZ38 188 aa14.95□□□□□ -0.02
CD40-201ENST00000372276 hADV38S2A0JD32 116 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 NKX6-3A6NJ46 265 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 C16orf97H3BN30 126 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 EIF3GO75821 320 aaKnown RBP eCLIP14.94□□□□□ -0.02
CD40-201ENST00000372276 IGKV1D-33P01593 117 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 IGKV1-33P01594 117 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 CDC34P49427 236 aaPredicted RBP14.94□□□□□ -0.02
CD40-201ENST00000372276 FABP9Q0Z7S8 132 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 ZNF788Q6ZQV5 615 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 RAB24Q969Q5 203 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 SMIM7Q9BQ49 75 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 ENY2Q9NPA8 101 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 TMEM140Q9NV12 185 aa14.94□□□□□ -0.02
CD40-201ENST00000372276 FOXA2Q9Y261 457 aaPredicted RBP14.94□□□□□ -0.02
CD40-201ENST00000372276 TRBV24-1A0A075B6N3 115 aa14.93□□□□□ -0.02
CD40-201ENST00000372276 VENTXO95231 258 aa14.93□□□□□ -0.02
CD40-201ENST00000372276 CD81P60033 236 aa14.93□□□□□ -0.02
CD40-201ENST00000372276 MRPS11P82912 194 aaKnown RBP14.93□□□□□ -0.02
CD40-201ENST00000372276 MEF2CQ06413 473 aaPredicted RBP14.93□□□□□ -0.02
CD40-201ENST00000372276 KIAA0141Q14154 515 aaPredicted RBP14.93□□□□□ -0.02
CD40-201ENST00000372276 ALKBH2Q6NS38 261 aa14.93□□□□□ -0.02
CD40-201ENST00000372276 Q8WTZ3 238 aa14.93□□□□□ -0.02
CD40-201ENST00000372276 C15orf61A6NNL5 157 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 PDE6DO43924 150 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 ZNF134P52741 427 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 HSPE1P61604 102 aaKnown RBP14.92□□□□□ -0.02
CD40-201ENST00000372276 HOXA4Q00056 320 aaPredicted RBP14.92□□□□□ -0.02
CD40-201ENST00000372276 RAB31Q13636 194 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 ZNF674Q2M3X9 581 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 CT45A1Q5HYN5 189 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 CT45A3Q8NHU0 189 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 NEIL1Q96FI4 390 aaPredicted RBP14.92□□□□□ -0.02
CD40-201ENST00000372276 GAFA1Q96PS6 74 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 SCNM1Q9BWG6 230 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 TMPRSS5Q9H3S3 457 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 SLC25A22Q9H936 323 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 FKBP11Q9NYL4 201 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 PRNDQ9UKY0 176 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 NCOR2Q9Y618 2525 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 FREM2Q5SZK8 3169 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 A0A1W2PPV4 95 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 TFF3Q07654 80 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 RPL39P5Q59GN2 51 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 CISD2Q8N5K1 135 aaKnown RBP14.92□□□□□ -0.02
CD40-201ENST00000372276 NANPQ8TBE9 248 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 ANAPC16Q96DE5 110 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 BTF3L4Q96K17 158 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 FAM210BQ96KR6 192 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 GAL3ST2Q9H3Q3 398 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 NPVFQ9HCQ7 196 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 TCF19Q9Y242 345 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 ZNF257Q9Y2Q1 563 aa14.92□□□□□ -0.02
CD40-201ENST00000372276 TRAV38-1A0A0B4J264 116 aa14.91□□□□□ -0.02
CD40-201ENST00000372276 F6UZH7 168 aa14.91□□□□□ -0.02
CD40-201ENST00000372276 S100PP25815 95 aa14.91□□□□□ -0.02
CD40-201ENST00000372276 FAM27E3Q08E93 113 aa14.91□□□□□ -0.02
CD40-201ENST00000372276 ZNF439Q8NDP4 499 aa14.91□□□□□ -0.02
CD40-201ENST00000372276 TMEM14BQ9NUH8 114 aa14.91□□□□□ -0.02
CD40-201ENST00000372276 LINC00312Q9Y6C7 94 aa14.91□□□□□ -0.02
CD40-201ENST00000372276 HOXA5P20719 270 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms