RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 H3BUX3 64 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 VDAC1P21796 283 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 CD24P25063 80 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 HES1Q14469 280 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 FAM219AQ8IW50 185 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 SLC35G3Q8N808 338 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 OR5R1Q8NH85 324 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 LSM10Q969L4 123 aaKnown RBP12.69□□□□□ -0.38
TMEM53-204ENST00000372243 RHOVQ96L33 236 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 TSNAXQ99598 290 aaKnown RBP12.69□□□□□ -0.38
TMEM53-204ENST00000372243 PITPNC1Q9UKF7 332 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 TCF19Q9Y242 345 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 TMED3Q9Y3Q3 217 aa12.69□□□□□ -0.38
TMEM53-204ENST00000372243 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
TMEM53-204ENST00000372243 SPDEFO95238 335 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 KRASP01116 189 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 IGLV2-23P01705 113 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 TMEM11P17152 192 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 LIN54Q6MZP7 749 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 Q71RC1 249 aaPredicted RBP12.68□□□□□ -0.38
TMEM53-204ENST00000372243 NPBQ8NG41 125 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 SSMEM1Q8WWF3 244 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 RITA1Q96K30 269 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 RAB18Q9NP72 206 aa12.68□□□□□ -0.38
TMEM53-204ENST00000372243 F8P00451 2351 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 SRRM4A7MD48 611 aaKnown RBP12.67□□□□□ -0.38
TMEM53-204ENST00000372243 SSNA1O43805 119 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 NDUFA3O95167 84 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 IGKV1-5P01602 117 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 HLA-GP17693 338 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 G6PCP35575 357 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 AKR1C2P52895 323 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 ERVK-16P61578 105 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 LYZL2Q7Z4W2 148 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 TMEM86BQ8N661 226 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 VSTM2AQ8TAG5 236 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 RBMXL1Q96E39 390 aaKnown RBP12.67□□□□□ -0.38
TMEM53-204ENST00000372243 RRNAD1Q96FB5 475 aaKnown RBP12.67□□□□□ -0.38
TMEM53-204ENST00000372243 BET1LQ9NYM9 111 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 MMP24Q9Y5R2 645 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 POMT1Q9Y6A1 747 aa12.67□□□□□ -0.38
TMEM53-204ENST00000372243 A6NDX4 124 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 NBR2O15453 112 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 IL6RP08887 468 aaPredicted RBP12.66□□□□□ -0.38
TMEM53-204ENST00000372243 P0C879 139 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 UBE2KP61086 200 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 PSG5Q15238 335 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 FBLN7Q53RD9 439 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 NMSQ5H8A3 153 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 RBMS3Q6XE24 437 aaKnown RBP12.66□□□□□ -0.38
TMEM53-204ENST00000372243 C16orf82Q7Z2V1 217 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 PUSL1Q8N0Z8 303 aaKnown RBP12.66□□□□□ -0.38
TMEM53-204ENST00000372243 SIGLECL1Q8N7X8 197 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 TEX45Q8NA69 505 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 UXS1Q8NBZ7 420 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 DMBX1Q8NFW5 382 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 RBM14Q96PK6 669 aaKnown RBP12.66□□□□□ -0.38
TMEM53-204ENST00000372243 PLSCR3Q9NRY6 295 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
TMEM53-204ENST00000372243 MAST4O15021 2626 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 BTBD17A6NE02 478 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 CRLF1O75462 422 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 OR2F2O95006 317 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 IFNA21P01568 189 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 IGHV4-59P01825 116 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 SAA1P0DJI8 122 aaPredicted RBP12.65□□□□□ -0.38
TMEM53-204ENST00000372243 HNF4GQ14541 408 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 MMDQ15546 238 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 OR4A47Q6IF82 309 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 H2BFWTQ7Z2G1 175 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 VKORC1L1Q8N0U8 176 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 OR4A5Q8NH83 315 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 KIAA1456Q9P272 454 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 ZFHX3Q15911 3703 aa12.65□□□□□ -0.38
TMEM53-204ENST00000372243 NSD1Q96L73 2696 aaPredicted RBP12.65□□□□□ -0.38
TMEM53-204ENST00000372243 RRHO14718 337 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 HOXA3O43365 443 aaPredicted RBP12.64□□□□□ -0.39
TMEM53-204ENST00000372243 ADAP1O75689 374 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 OR2A4O95047 310 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 CRYGBP07316 175 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 FGF2P09038 288 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 HOXB5P09067 269 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 FAM157CP0CG43 387 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 SLC25A6P12236 298 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 CNTFRP26992 372 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 F2RL1P55085 397 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 RRAS2P62070 204 aaPredicted RBP12.64□□□□□ -0.39
TMEM53-204ENST00000372243 GGNBP1Q5YKI7 109 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 RNASE11Q8TAA1 199 aaKnown RBP12.64□□□□□ -0.39
TMEM53-204ENST00000372243 TMEM167AQ8TBQ9 72 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 OR2A7Q96R45 310 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 MED28Q9H204 178 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 VPREB3Q9UKI3 123 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 FGF16O43320 207 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 SLC25A17O43808 307 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 KBTBD11O94819 623 aa12.64□□□□□ -0.39
TMEM53-204ENST00000372243 SSX9Q7RTT3 188 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms