RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PATE4P0C8F1 98 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 OR3A4PP47883 348 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 LGALS7P47929 136 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 UBE2V1Q13404 147 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 GPR27Q9NS67 375 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 LOC101059948A0A1B0GTJ6 334 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 TRACP01848 142 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 SNRPCP09234 159 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 ST20Q9HBF5 79 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 LIPT2A6NK58 231 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 OR2A4O95047 310 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 OR2A7Q96R45 310 aa12.13□□□□□ -0.47
RAPGEF1-202ENST00000372190 TFPI2P48307 235 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 HSD52Q0P140 79 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 RTN4RL2Q86UN3 420 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 ASB10Q8WXI3 467 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 MS4A6AQ9H2W1 248 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 TMEM78Q5T7P6 136 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 TSPO2Q5TGU0 170 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 TRAV9-2A0A087WT02 112 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 IFITM2Q01629 132 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 RNASEH2CQ8TDP1 164 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 CARHSP1Q9Y2V2 147 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 A0A0G2JMM0 328 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 A0A1W2PPB8 328 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 KIR3DP1A8MWS1 328 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 H3BRM9 83 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 TMEM50BP56557 158 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 FXYD3Q14802 87 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 ZNF585BQ52M93 769 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 ATP6V0BQ99437 205 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 YAE1D1Q9NRH1 226 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 ANOS1P23352 680 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 COX7A1P24310 79 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
RAPGEF1-202ENST00000372190 TRAV2A0A0B4J234 112 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 RND3P61587 244 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 LYZL2Q7Z4W2 148 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 PXMP4Q9Y6I8 212 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 GPR82Q96P67 336 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 NHLRC3Q5JS37 347 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 SPAG17Q6Q759 2223 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 OGG1O15527 345 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 CBLN1P23435 193 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 COL10A1Q03692 680 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-202ENST00000372190 AHRRA9YTQ3 701 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 CDC42EP2O14613 210 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 HYPMO75409 117 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 SLC25A40Q8TBP6 338 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 SOSTQ9BQB4 213 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 C2orf88Q9BSF0 95 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 VENTXO95231 258 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 IRF3Q14653 427 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 PDCD1Q15116 288 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 GAPTQ8N292 157 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 MS4A5Q9H3V2 200 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 NPVFQ9HCQ7 196 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 EPDR1Q9UM22 224 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 CNTFRP26992 372 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 RPS4XP62701 263 aaKnown RBP12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 TMEM52Q8NDY8 209 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 J3QR06 171 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 CSRP1P21291 193 aaKnown RBP12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 MBNL2Q5VZF2 373 aaKnown RBP12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 FBXW9Q5XUX1 488 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 PHLDA3Q9Y5J5 127 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 CLEC2AQ6UVW9 174 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 ZBTB34Q8NCN2 500 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 COA4Q9NYJ1 87 aa12.1□□□□□ -0.47
RAPGEF1-202ENST00000372190 RUNX1Q01196 453 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 GOLT1AQ6ZVE7 132 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 PNKDQ8N490 385 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 ABHD14BQ96IU4 210 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 INO80CQ6PI98 192 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 GPR35Q9HC97 309 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 MRM2Q9UI43 246 aaKnown RBP12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 CCL27Q9Y4X3 112 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 CEACAM3P40198 252 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 SFTA2Q6UW10 78 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 SPSB4Q96A44 273 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 UCN2Q96RP3 112 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 KLF12Q9Y4X4 402 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 UBE2CO00762 179 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 PILRAQ9UKJ1 303 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 TRBV20OR9-2A0A075B6H5 130 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 MESTQ5EB52 335 aa12.09□□□□□ -0.47
RAPGEF1-202ENST00000372190 PPYP01298 95 aa12.08□□□□□ -0.48
RAPGEF1-202ENST00000372190 APOHP02749 345 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF1-202ENST00000372190 MMDQ15546 238 aa12.08□□□□□ -0.48
RAPGEF1-202ENST00000372190 VAX1Q5SQQ9 334 aa12.08□□□□□ -0.48
RAPGEF1-202ENST00000372190 OR4D11Q8NGI4 311 aa12.08□□□□□ -0.48
RAPGEF1-202ENST00000372190 C18orf15Q96N68 181 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms