RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 ZNF71Q9NQZ8 489 aaPredicted RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 RNF7Q9UBF6 113 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 FBXO7Q9Y3I1 522 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR51B2Q9Y5P1 312 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 SHANK1Q9Y566 2161 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 CCDC160A6NGH7 325 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 GGT3PA6NGU5 568 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 NDUFB4O95168 129 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 ARG1P05089 322 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR13C7P0DN81 318 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 RPL12P30050 165 aaKnown RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 RND3P61587 244 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 RPS27AP62979 156 aaKnown RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR4M1Q8NGD0 313 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR6K6Q8NGW6 343 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 ZMYND19Q96E35 227 aaPredicted RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 LPAR5Q9H1C0 372 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 ZNF257Q9Y2Q1 563 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 WIPI2Q9Y4P8 454 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 V9GY05 133 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 CYB5BO43169 146 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 WDR1O75083 606 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 MPDU1O75352 247 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 SCO1O75880 301 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 CDRT1O95170 752 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 FAM157CP0CG43 387 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 EDNRAP25101 427 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 CNTFRP26992 372 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 MPGP29372 298 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 EIF2B2P49770 351 aaKnown RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 BIDP55957 195 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 SEC61A1P61619 476 aaKnown RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 INSL4Q14641 139 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR7A5Q15622 319 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 CEACAM16Q2WEN9 425 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 OCIAD2Q56VL3 154 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 LCE2DQ5TA82 110 aaPredicted RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR51A4Q8NGJ6 313 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR1L8Q8NGR8 309 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 ADAT3Q96EY9 351 aaPredicted RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 MRAP2Q96G30 205 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 SNHG12Q9BXW3 62 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 PECRQ9BY49 303 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 SEC61A2Q9H9S3 476 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 MED9Q9NWA0 146 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 NOP16Q9Y3C1 178 aaKnown RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 HSPB11Q9Y547 144 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 SLC25A15Q9Y619 301 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 A0A0C4DFX4 3053 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 C5orf63A6NC05 138 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 NDUFB6O95139 128 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 CSN2P05814 226 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 PSMB9P28065 219 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 PCBD1P61457 104 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 RPS18P62269 152 aaKnown RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 TMEM128Q5BJH2 165 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 CLEC12AQ5QGZ9 265 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 FAM27D1Q5T7N8 215 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 Q6P435 159 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 ZCCHC24Q8N2G6 241 aaKnown RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 ZDHHC22Q8N966 263 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 TMEM178AQ8NBL3 297 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 OR10AC1Q8NH08 325 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 FAM57AQ8TBR7 257 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 EXTL1Q92935 676 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 STARD4Q96DR4 205 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 RAB3CQ96E17 227 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 DNAJA3Q96EY1 480 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 KRTAP3-3Q9BYR6 98 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 KRTAP3-2Q9BYR7 98 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 MBNL3Q9NUK0 354 aaKnown RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 GLS2Q9UI32 602 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 RAB22AQ9UL26 194 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 AKAP9Q99996 3911 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 FRYLO94915 3013 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 CDC14CA4D256 554 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 OR4C46A6NHA9 309 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 PHF1O43189 567 aaPredicted RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 TRIAP1O43715 76 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 RPL35AP18077 110 aaKnown RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 GNLYP22749 145 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 APLNRP35414 380 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 RPL35P42766 123 aaKnown RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 SELENOPP49908 381 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 RHOGP84095 191 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 PLA2G7Q13093 441 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 EIF2B1Q14232 305 aaKnown RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 ZNF146Q15072 292 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 TEX36Q5VZQ5 186 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 CNIH2Q6PI25 160 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 NAA40Q86UY6 237 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 SKA3Q8IX90 412 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 SECTM1Q8WVN6 248 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 OR5P3Q8WZ94 311 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 SFXN3Q9BWM7 321 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 OR10A2Q9H208 303 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 ZNF256Q9Y2P7 627 aaPredicted RBP3.13□□□□□ -1.91
MCF2-203ENST00000370576 USP24Q9UPU5 2620 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 TRAV17A0A0B4J275 112 aa3.13□□□□□ -1.91
MCF2-203ENST00000370576 LOC107986453A0A1B0GWG9 222 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms