RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 HLA-DQB1P01920 261 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 SRSF4Q08170 494 aaKnown RBP9.53□□□□□ -0.88
COL11A1-203ENST00000370096 ICAM4Q14773 271 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 CLEC2AQ6UVW9 174 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 DIRC2Q96SL1 478 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 DCTN5Q9BTE1 182 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 TRAV24A0A0B4J272 114 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 GCM2O75603 506 aaPredicted RBP9.53□□□□□ -0.88
COL11A1-203ENST00000370096 HTN3P15516 51 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 RNASE4P34096 147 aaKnown RBP9.53□□□□□ -0.88
COL11A1-203ENST00000370096 TTC9CQ8N5M4 171 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 PIKFYVEQ9Y2I7 2098 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 MPV17P39210 176 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 SYNGR3O43761 229 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 TMEM50AO95807 157 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 PRB4P10163 310 aaPredicted RBP9.53□□□□□ -0.88
COL11A1-203ENST00000370096 FAM106AQ4KMX7 169 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 VAX1Q5SQQ9 334 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 REPIN1Q9BWE0 567 aaKnown RBP9.53□□□□□ -0.88
COL11A1-203ENST00000370096 PROB1E7EW31 1015 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 DRD3P35462 400 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 PAX2Q02962 417 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 TMEM52Q8NDY8 209 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 NABP2Q9BQ15 211 aa9.53□□□□□ -0.88
COL11A1-203ENST00000370096 RBMY1BA6NDE4 496 aaKnown RBP9.52□□□□□ -0.88
COL11A1-203ENST00000370096 RBMY1EA6NEQ0 496 aaKnown RBP9.52□□□□□ -0.88
COL11A1-203ENST00000370096 PEX7O00628 323 aa9.52□□□□□ -0.88
COL11A1-203ENST00000370096 RBMY1DP0C7P1 496 aaKnown RBP9.52□□□□□ -0.88
COL11A1-203ENST00000370096 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.88
COL11A1-203ENST00000370096 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.88
COL11A1-203ENST00000370096 SFTPCP11686 197 aa9.52□□□□□ -0.88
COL11A1-203ENST00000370096 HOXA5P20719 270 aa9.52□□□□□ -0.88
COL11A1-203ENST00000370096 CENPVQ7Z7K6 275 aaPredicted RBP9.52□□□□□ -0.88
COL11A1-203ENST00000370096 CD1AP06126 327 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 CNTFRP26992 372 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 H2BFSP57053 126 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 SELENOTP62341 195 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 ZNF818PQ6ZRF7 136 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 OR11H4Q8NGC9 324 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 NPIPB3Q92617 1050 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 TRBV9A0A0B4J1U6 114 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 MC5RP33032 325 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 COX14Q96I36 57 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 SCO2A0A1W2PP80 73 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 GCHFRP30047 84 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 TNFSF10P50591 281 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 ACSF3Q4G176 576 aaPredicted RBP9.52□□□□□ -0.89
COL11A1-203ENST00000370096 C1orf185Q5T7R7 199 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 GPR132Q9UNW8 380 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.89
COL11A1-203ENST00000370096 POLR2AP24928 1970 aaKnown RBP9.52□□□□□ -0.89
COL11A1-203ENST00000370096 IGHV3OR16-8A0A075B7F1 116 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 MARCH11A6NNE9 402 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 CA11O75493 328 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 CTSSP25774 331 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 NPC2P61916 151 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 P2RY6Q15077 328 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 TEX29Q8N6K0 151 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 ZNF721Q8TF20 911 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 SDHCQ99643 169 aaPredicted RBP9.51□□□□□ -0.89
COL11A1-203ENST00000370096 C5orf66Q9H5L9 145 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 C7orf66A4D0T2 115 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 MGST3O14880 152 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 CGAP01215 116 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 NPPCP23582 126 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 ITLN2Q8WWU7 325 aaPredicted RBP9.51□□□□□ -0.89
COL11A1-203ENST00000370096 AMELYQ99218 206 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 TOGARAM1Q9Y4F4 1720 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 LEPP41159 167 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 DANCRP0C864 163 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 SNRPD3P62318 126 aaKnown RBP9.51□□□□□ -0.89
COL11A1-203ENST00000370096 PPP1R3EQ9H7J1 279 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 PLAC1Q9HBJ0 212 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 IGHV3-64A0A075B6Q5 118 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 PRR32B1ATL7 298 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 LIPFP07098 398 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 CD69Q07108 199 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 GCSAMQ8N6F7 178 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 NEUROG1Q92886 237 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 TFF2Q03403 129 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 RSPO4Q2I0M5 234 aaPredicted RBP9.51□□□□□ -0.89
COL11A1-203ENST00000370096 TRPM6Q9BX84 2022 aa9.51□□□□□ -0.89
COL11A1-203ENST00000370096 ZNF658BQ4V348 819 aaPredicted RBP9.5□□□□□ -0.89
COL11A1-203ENST00000370096 LOC390937A0A1W2PQ73 354 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 MALP21145 153 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 IFITM2Q01629 132 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 EEF1AKMT3Q96AZ1 226 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 TCF23Q7RTU1 214 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 SSBP4Q9BWG4 385 aaPredicted RBP9.5□□□□□ -0.89
COL11A1-203ENST00000370096 NHP2Q9NX24 153 aaKnown RBP9.5□□□□□ -0.89
COL11A1-203ENST00000370096 DLL3Q9NYJ7 618 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 SELENOKQ9Y6D0 94 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 ARHGEF17Q96PE2 2063 aaPredicted RBP9.5□□□□□ -0.89
COL11A1-203ENST00000370096 SPAARA0A1B0GVQ0 90 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 PF4P02776 101 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 TSPOP30536 169 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 AQP3Q92482 292 aa9.5□□□□□ -0.89
COL11A1-203ENST00000370096 ALX4Q9H161 411 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms