RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 PTGDSP41222 190 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 LHX2P50458 406 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 KCNMB1Q16558 191 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 STUMQ69YW2 141 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 PLSCR2Q9NRY7 297 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 DECR2Q9NUI1 292 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 DUSP13Q9UII6 198 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 M0R2Z0 102 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 TNFSF13O75888 250 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 OR2H2O95918 312 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 GCNT2Q8N0V5 402 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 RNASE8Q8TDE3 154 aaKnown RBP8.79□□□□□ -1
PRPF38B-201ENST00000370021 LEAP2Q969E1 77 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 FAM122AQ96E09 287 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 PMCHL2Q9BQD1 86 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 ADAMTS9Q9P2N4 1935 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 DPRXA6NFQ7 191 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 RRHO14718 337 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 MT-CO2P00403 227 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 FOLR3P41439 243 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 PAFAH1B2P68402 229 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 ATP6V1FQ16864 119 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 C10orf128Q5T292 105 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 TCTEX1D1Q8N7M0 179 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 NANOS1Q8WY41 292 aaKnown RBP8.79□□□□□ -1
PRPF38B-201ENST00000370021 R3HDM4Q96D70 268 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 PXMP4Q9Y6I8 212 aa8.79□□□□□ -1
PRPF38B-201ENST00000370021 HELTA6NFD8 242 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 C5orf67F2Z3F1 127 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 WNT9BO14905 357 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 NPPCP23582 126 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 GPR12P47775 334 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 CEACAM21Q3KPI0 293 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 KLHDC1Q8N7A1 406 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 ZNF738Q8NE65 137 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 DEFB108BQ8NET1 73 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 SSC4DQ8WTU2 575 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 TMEM54Q969K7 222 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 CRISPLD2Q9H0B8 497 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 ASCL3Q9NQ33 180 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 TRAV24A0A0B4J272 114 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 PDE6DO43924 150 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 USF1P22415 310 aaPredicted RBP8.78□□□□□ -1
PRPF38B-201ENST00000370021 CRYGSP22914 178 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 CTSSP25774 331 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 DUSP3P51452 185 aaPredicted RBP8.78□□□□□ -1
PRPF38B-201ENST00000370021 ZNF137PP52743 207 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 MFAP2P55001 183 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 FOXA3P55318 350 aaPredicted RBP8.78□□□□□ -1
PRPF38B-201ENST00000370021 UBE2NP61088 152 aaKnown RBP8.78□□□□□ -1
PRPF38B-201ENST00000370021 PMCHL1Q16048 86 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 OR2D3Q8NGH3 330 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 OR5B3Q8NH48 314 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 GNB4Q9HAV0 340 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 UQCR10Q9UDW1 63 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 HSBP1L1C9JCN9 74 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 M0QZ24 198 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 CLDN14O95500 239 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 CGAP01215 116 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 SSTR5P35346 364 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 RPL30P62888 115 aaKnown RBP8.78□□□□□ -1
PRPF38B-201ENST00000370021 RELQ04864 619 aaPredicted RBP8.78□□□□□ -1
PRPF38B-201ENST00000370021 CNEP1R1Q8N9A8 125 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 ELOVL5Q9NYP7 299 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 CLEC1BQ9P126 229 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 FBXL7Q9UJT9 491 aa8.78□□□□□ -1
PRPF38B-201ENST00000370021 C2orf16Q68DN1 1984 aa8.77□□□□□ -1
PRPF38B-201ENST00000370021 PIGBOS1A0A0B4J2F0 54 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 UMODP07911 640 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 TIMP3P35625 211 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 NXPH1P58417 271 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 C1orf53Q5VUE5 145 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 SPATA31B1PQ5VZV4 182 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 ZNF324BQ6AW86 544 aaPredicted RBP8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 ALKBH7Q9BT30 221 aaPredicted RBP8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 DEFB127Q9H1M4 99 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 LRRC30A6NM36 301 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 PLAUP00749 431 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 CYB561P49447 251 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 ZNF585BQ52M93 769 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 LYSMD4Q5XG99 296 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 LHFPL4Q7Z7J7 247 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 TMEM210A6NLX4 147 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 FKBP2P26885 142 aaKnown RBP8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 CEACAM8P31997 349 aaPredicted RBP8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 LCN2P80188 198 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 ABLIM2Q6H8Q1 611 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 OR4A47Q6IF82 309 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 PCSK4Q6UW60 755 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 ZC2HC1AQ96GY0 325 aa8.77□□□□□ -1.01
PRPF38B-201ENST00000370021 SPINT2O43291 252 aa8.76□□□□□ -1.01
PRPF38B-201ENST00000370021 FOXH1O75593 365 aa8.76□□□□□ -1.01
PRPF38B-201ENST00000370021 UQCRFS1P47985 274 aa8.76□□□□□ -1.01
PRPF38B-201ENST00000370021 HIST3H3Q16695 136 aa8.76□□□□□ -1.01
PRPF38B-201ENST00000370021 LDLRAD2Q5SZI1 272 aa8.76□□□□□ -1.01
PRPF38B-201ENST00000370021 OR4B1Q8NGF8 309 aa8.76□□□□□ -1.01
PRPF38B-201ENST00000370021 OR2T6Q8NHC8 308 aa8.76□□□□□ -1.01
PRPF38B-201ENST00000370021 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms