RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TMEM11P17152 192 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 CHRNA7P36544 502 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 PPP1CCP36873 323 aaKnown RBP9.95□□□□□ -0.82
USF1-203ENST00000368021 EFNA4P52798 201 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 OR2B8PP59922 312 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 KIAA0141Q14154 515 aaPredicted RBP9.95□□□□□ -0.82
USF1-203ENST00000368021 DEFB113Q30KQ7 82 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 SMIM15Q7Z3B0 74 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 BAP18Q8IXM2 172 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 ZBTB34Q8NCN2 500 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 OR10A7Q8NGE5 316 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 OR52M1Q8NGK5 317 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 OR8U1Q8NH10 309 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 RNASEH2CQ8TDP1 164 aaKnown RBP9.95□□□□□ -0.82
USF1-203ENST00000368021 PERPQ96FX8 193 aa9.95□□□□□ -0.82
USF1-203ENST00000368021 PARP12Q9H0J9 701 aaKnown RBP9.95□□□□□ -0.82
USF1-203ENST00000368021 RBM7Q9Y580 266 aaKnown RBP9.95□□□□□ -0.82
USF1-203ENST00000368021 MALRD1Q5VYJ5 2156 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 C3orf85A0A1B0GTC6 90 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 A8MWP6 167 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 RNASEK-C17orf49H0YIS7 233 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 HSD17B6O14756 317 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 TAAR5O14804 337 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 FBXO24O75426 580 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 LY6HO94772 140 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 GCGP01275 180 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 CD5P06127 495 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 OR5AC1P0C628 307 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 SRPXP78539 464 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 TMEM187Q14656 261 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 GNMTQ14749 295 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 MORN2Q502X0 79 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 DCAF12L2Q5VW00 463 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 TBC1D26Q86UD7 250 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 FGFRL1Q8N441 504 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 ZNF645Q8N7E2 425 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 AGMATQ9BSE5 352 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 GNG12Q9UBI6 72 aa9.94□□□□□ -0.82
USF1-203ENST00000368021 PGLYRP1O75594 196 aaPredicted RBP9.93□□□□□ -0.82
USF1-203ENST00000368021 SFTA3P0C7M3 94 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 F2RL1P55085 397 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 CLEC9AQ6UXN8 241 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 ZNF841Q6ZN19 808 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 LIAT1Q6ZQX7 453 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 MSI2Q96DH6 328 aaKnown RBP9.93□□□□□ -0.82
USF1-203ENST00000368021 SMIM8Q96KF7 97 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 ACTR3CQ9C0K3 210 aaPredicted RBP9.93□□□□□ -0.82
USF1-203ENST00000368021 TMEM222Q9H0R3 208 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 RPS10P5Q9NQ39 176 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 PARP11Q9NR21 331 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 IGHV3-43A0A0B4J1X8 118 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 PIGBOS1A0A0B4J2F0 54 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 SMCO3A2RU48 225 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 H0Y980 276 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 PHF1O43189 567 aaPredicted RBP9.93□□□□□ -0.82
USF1-203ENST00000368021 IGHV3-43DP0DP04 118 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 EPHA1P21709 976 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 F2RP25116 425 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 TMEM200BQ69YZ2 307 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 DRAM1Q8N682 238 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 ZNF714Q96N38 554 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 TP53RKQ96S44 253 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 OR2D2Q9H210 308 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 IDI2-AS1Q9NZ38 188 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 FAM96BQ9Y3D0 163 aa9.93□□□□□ -0.82
USF1-203ENST00000368021 HIVEP1P15822 2718 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 ZNF705EA8MWA4 302 aaPredicted RBP9.92□□□□□ -0.82
USF1-203ENST00000368021 NDUFS7O75251 213 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 OMGP23515 440 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 UCP1P25874 307 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 SP6Q3SY56 376 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 HEPN1Q6WQI6 88 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 LGI3Q8N145 548 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 OR8B3Q8NGG8 313 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 H1FXQ92522 213 aaKnown RBP9.92□□□□□ -0.82
USF1-203ENST00000368021 NEIL1Q96FI4 390 aaPredicted RBP9.92□□□□□ -0.82
USF1-203ENST00000368021 TMEM56Q96MV1 263 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 OR8B2Q96RD0 313 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 CLCC1Q96S66 551 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 CACFD1Q9UGQ2 172 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 RPUSD1Q9UJJ7 312 aaKnown RBP9.92□□□□□ -0.82
USF1-203ENST00000368021 KCNS2Q9ULS6 477 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 TMEM56-RWDD3S4R434 201 aa9.92□□□□□ -0.82
USF1-203ENST00000368021 RNF212BA8MTL3 300 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 CCSO14618 274 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 CDS2O95674 445 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 GNG10P50151 68 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 RAB7AP51149 207 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 ATP5J2P56134 94 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 LTC4SQ16873 150 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 FAM53AQ6NSI3 398 aaPredicted RBP9.91□□□□□ -0.82
USF1-203ENST00000368021 C22orf15Q8WYQ4 148 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 MBD6Q96DN6 1003 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 RHOVQ96L33 236 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 FOXC2Q99958 501 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 NMES1Q9C002 83 aa9.91□□□□□ -0.82
USF1-203ENST00000368021 METTL8Q9H825 291 aaKnown RBP9.91□□□□□ -0.82
USF1-203ENST00000368021 LIN7CQ9NUP9 197 aaKnown RBP9.91□□□□□ -0.82
USF1-203ENST00000368021 PRR13Q9NZ81 148 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms