RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 RPLP1P05386 114 aaKnown RBP7.72□□□□□ -1.17
SYNE1-205ENST00000367251 BTCP35070 178 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 FAM53AQ6NSI3 398 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-205ENST00000367251 FLVCR1-AS1Q8TAF5 88 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF488Q96MN9 340 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 HIGD1AQ9Y241 93 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 IGLV3-12A0A075B6K2 115 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 SNURFLB1AK76 121 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF883P0CG24 379 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 CCL1P22362 96 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 RPL29P47914 159 aaKnown RBP7.72□□□□□ -1.17
SYNE1-205ENST00000367251 RUNX1Q01196 453 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 ITLN2Q8WWU7 325 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-205ENST00000367251 GGACTQ9BVM4 153 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 CHCHD2Q9Y6H1 151 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-205ENST00000367251 TMEM56-RWDD3S4R434 201 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF646O15015 1829 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-205ENST00000367251 PSMB11A5LHX3 300 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 SYNGR3O43761 229 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 HIST1H1BP16401 226 aaKnown RBP7.71□□□□□ -1.17
SYNE1-205ENST00000367251 Q5BKY6 102 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 WDR25Q64LD2 544 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-205ENST00000367251 C3orf56Q8N813 242 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 A0A1W2PQM1 296 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 FOXH1O75593 365 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 VENTXO95231 258 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 CTSBP07858 339 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 CELA2AP08217 269 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 MAS1LP35410 378 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 GLIPR1P48060 266 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 SH3BGRL3Q9H299 93 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 IDI2-AS1Q9NZ38 188 aa7.71□□□□□ -1.17
SYNE1-205ENST00000367251 SOX21Q9Y651 276 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-205ENST00000367251 CBY3A6NI87 242 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 TMEM250H0YL14 139 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 HYPMO75409 117 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 TSPOP30536 169 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 PPOXP50336 477 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 OR51M1Q9H341 326 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 HLA-DQA1P01909 254 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 GAS1P54826 345 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF880Q6PDB4 577 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 ARL6IP6Q8N6S5 226 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 OR4C13Q8NGP0 309 aa7.71□□□□□ -1.18
SYNE1-205ENST00000367251 MRPL32Q9BYC8 188 aaKnown RBP7.71□□□□□ -1.18
SYNE1-205ENST00000367251 EPOPA6NHQ4 379 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 H7C2G1 150 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 IER3P46695 156 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 SNRPD3P62318 126 aaKnown RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 OR4A47Q6IF82 309 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF818PQ6ZRF7 136 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 LINC00518Q8N0U6 118 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 METTL1Q9UBP6 276 aaKnown RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 TGFBR3LH3BV60 316 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 PSCAO43653 123 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 CDX1P47902 265 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 HSPE1P61604 102 aaKnown RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 OR1P1Q8NH06 330 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 IGHV3-72A0A0B4J1Y9 119 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF729A6NN14 1252 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 A8MWL6 223 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 HIST3H3Q16695 136 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 C1QTNF5Q9BXJ0 243 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 F12P00748 615 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 STAG3L2P0CL84 134 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 CTSSP25774 331 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF146Q15072 292 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 FAM216AQ8WUB2 273 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 PCM1Q15154 2024 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 ODAMA1E959 279 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 MFAP4P55083 255 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 ARF6P62330 175 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 MMD2Q8IY49 270 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 C8orf46Q8TAG6 207 aa7.7□□□□□ -1.18
SYNE1-205ENST00000367251 RTBDNQ9BSG5 229 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-205ENST00000367251 A0A087WWC5 75 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 TRAV39A0A0B4J263 110 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 COX6CP09669 75 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 NUBP1P53384 320 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 GBGT1Q8N5D6 347 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 SLC25A28Q96A46 364 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 SCNM1Q9BWG6 230 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 OPN3Q9H1Y3 402 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 CACNA1CQ13936 2221 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 LOC102724200A0A096LPH7 203 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 CEACAM18A8MTB9 384 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 KBTBD11O94819 623 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 CD99P14209 185 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 UCP1P25874 307 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 SUMO2P61956 95 aaKnown RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 GTF3AQ92664 365 aaKnown RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 HIST1H2BAQ96A08 127 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 RAB37Q96AX2 223 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF430Q9H8G1 570 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-205ENST00000367251 CALYQ9NYX4 217 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 UNC13CQ8NB66 2214 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF735P0CB33 412 aa7.69□□□□□ -1.18
SYNE1-205ENST00000367251 ZNF362Q5T0B9 420 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms