RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SERF2P84101 59 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 LGALSLQ3ZCW2 172 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 ZNF818PQ6ZRF7 136 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 NOL4LQ96MY1 436 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 C5orf66Q9H5L9 145 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 VAX2Q9UIW0 290 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 TCF19Q9Y242 345 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 PITX3O75364 302 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 ZNF705AQ6ZN79 300 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 OR10J6PQ8NGY7 276 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 OR2T10Q8NGZ9 312 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 RPS11P62280 158 aaKnown RBP eCLIP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 LSM10Q969L4 123 aaKnown RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 TM2D1Q9BX74 207 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 SRD5A3Q9H8P0 318 aa9.8□□□□□ -0.84
SYNE1-204ENST00000367248 AURKAIP1Q9NWT8 199 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-204ENST00000367248 A0A1W2PS18 150 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 S1PR2O95136 353 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 RPL39P5Q59GN2 51 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 SELENOHQ8IZQ5 122 aaKnown RBP9.79□□□□□ -0.84
SYNE1-204ENST00000367248 OR13A1Q8NGR1 328 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 RAX2Q96IS3 184 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 DPM3Q9P2X0 92 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 ARID2Q68CP9 1835 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 A0A0G2JK05 382 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 COMPP49747 757 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-204ENST00000367248 FAM90A1Q86YD7 464 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 TMEM18Q96B42 140 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 OR5AC2Q9NZP5 309 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 CXorf1O96002 111 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 LINC00869P0C866 280 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 CCL3L1P16619 93 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 G0S2P27469 103 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 COL8A1P27658 744 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 FOXG1P55316 489 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-204ENST00000367248 MEF2CQ06413 473 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-204ENST00000367248 GGNQ86UU5 652 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 MRPL30Q8TCC3 161 aaKnown RBP9.79□□□□□ -0.84
SYNE1-204ENST00000367248 TMEM37Q8WXS4 190 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
SYNE1-204ENST00000367248 OTOFQ9HC10 1997 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 SPANXN1Q5VSR9 72 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 MDS2Q8NDY4 140 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 JMJD8Q96S16 334 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 RBKSQ9H477 322 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 DOCK7Q96N67 2140 aa9.79□□□□□ -0.84
SYNE1-204ENST00000367248 PMCHP20382 165 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 KHDC3LQ587J8 217 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 C3orf56Q8N813 242 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 PRSS3P2Q8NHM4 247 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 TRAPPC1Q9Y5R8 145 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 PXMP4Q9Y6I8 212 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 C1QL1O75973 258 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 CLPSP04118 112 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 VDAC2P45880 294 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-204ENST00000367248 ZNF430Q9H8G1 570 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-204ENST00000367248 TUBD1Q9UJT1 453 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 OR10G8Q8NGN5 311 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 C8orf46Q8TAG6 207 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 QTRT1Q9BXR0 403 aaKnown RBP9.78□□□□□ -0.84
SYNE1-204ENST00000367248 MELTFP08582 738 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 IZUMO4Q1ZYL8 232 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 OR10C1Q96KK4 312 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 ELOVL1Q9BW60 279 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 DEDDO75618 318 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 RD3LP0DJH9 198 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 Q6ZS92 163 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 PAXXQ9BUH6 204 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 IL18BPO95998 194 aa9.78□□□□□ -0.84
SYNE1-204ENST00000367248 TMEM218A2RU14 115 aa9.77□□□□□ -0.84
SYNE1-204ENST00000367248 FCN1O00602 326 aa9.77□□□□□ -0.84
SYNE1-204ENST00000367248 MFAP4P55083 255 aa9.77□□□□□ -0.84
SYNE1-204ENST00000367248 USF3Q68DE3 2245 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 A0A0G2JNJ9 132 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 IGSF23A1L1A6 192 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 BMPR1BO00238 502 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 TM4SF5O14894 197 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 TMEM78Q5T7P6 136 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 OR10S1Q8NGN2 331 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 Q9UFV3 132 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 TCRBV4S1A1TA0A5B7 111 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 P01737 135 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 CD81P60033 236 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 SUMO1P63165 101 aaKnown RBP9.77□□□□□ -0.85
SYNE1-204ENST00000367248 TNFRSF9Q07011 255 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 PLSCR4Q9NRQ2 329 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 KBTBD11-OT1A0A1B0GTJ5 212 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 PQLC2LA1A4F0 135 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 EIF3GO75821 320 aaKnown RBP eCLIP9.77□□□□□ -0.85
SYNE1-204ENST00000367248 KIR2DL2P43627 348 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-204ENST00000367248 C3orf36Q3SXR2 165 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 BRD3OSQ6XYD6 125 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 FAM210BQ96KR6 192 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 TMEM56-RWDD3S4R434 201 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 PRR32B1ATL7 298 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 NPIPB11E5RHQ5 1161 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 DEFA6Q01524 100 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 LRRC75BQ2VPJ9 315 aa9.77□□□□□ -0.85
SYNE1-204ENST00000367248 OSR1Q8TAX0 266 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms