RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CELA3BP08861 270 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 P0C879 139 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 GAGE1Q13065 139 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 GABRA6Q16445 453 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 TBC1D28Q2M2D7 210 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 BTNL3Q6UXE8 466 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 GOLT1BQ9Y3E0 138 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 SH2D1BO14796 132 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
PRKN-204ENST00000366896 TMEM256Q8N2U0 113 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 FGFRL1Q8N441 504 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 SCCPDHQ8NBX0 429 aa12.3□□□□□ -0.44
PRKN-204ENST00000366896 NEIL1Q96FI4 390 aaPredicted RBP12.3□□□□□ -0.44
PRKN-204ENST00000366896 MLNRO43193 412 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 SELEP16581 610 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 OR3A1P47881 315 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 RPL29P47914 159 aaKnown RBP12.29□□□□□ -0.44
PRKN-204ENST00000366896 MRPL49Q13405 166 aaKnown RBP12.29□□□□□ -0.44
PRKN-204ENST00000366896 FAM53AQ6NSI3 398 aaPredicted RBP12.29□□□□□ -0.44
PRKN-204ENST00000366896 TMEM144Q7Z5S9 345 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 ZNF645Q8N7E2 425 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 MS4A10Q96PG2 267 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 TRAPPC1Q9Y5R8 145 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 PXMP4Q9Y6I8 212 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 CEBPDP49716 269 aaPredicted RBP12.29□□□□□ -0.44
PRKN-204ENST00000366896 HOXA4Q00056 320 aaPredicted RBP12.29□□□□□ -0.44
PRKN-204ENST00000366896 EIF4EBP1Q13541 118 aaPredicted RBP12.29□□□□□ -0.44
PRKN-204ENST00000366896 ALKBH6Q3KRA9 238 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 FAM78BQ5VT40 261 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 WDYHV1Q96HA8 205 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 BTF3L4Q96K17 158 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 HES4Q9HCC6 221 aa12.29□□□□□ -0.44
PRKN-204ENST00000366896 NUPR1O60356 82 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 HPRT1P00492 218 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 CD99P14209 185 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 RAC2P15153 192 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 CHRNA7P36544 502 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 OR8G2PQ6IF36 304 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 OR10G9Q8NGN4 311 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 OR10G7Q8NGN6 311 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 TBX15Q96SF7 602 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 A0A1B0GUS0 222 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 IQCF6A8MYZ5 107 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 PAGE4O60829 102 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 SMPD2O60906 423 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 IGHG3P01860 377 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 NPPCP23582 126 aa12.28□□□□□ -0.44
PRKN-204ENST00000366896 BSNQ9UPA5 3926 aa12.27□□□□□ -0.44
PRKN-204ENST00000366896 ATMQ13315 3056 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 TRGV5A0A0B4J1U4 118 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 A0A0U1RQK1 487 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 ZNF320A2RRD8 509 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.45
PRKN-204ENST00000366896 CDIPTO14735 213 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 ZNF705DP0CH99 300 aaPredicted RBP12.27□□□□□ -0.45
PRKN-204ENST00000366896 ZNF705BP0CI00 300 aaPredicted RBP12.27□□□□□ -0.45
PRKN-204ENST00000366896 GCH1P30793 250 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 PPP1CBP62140 327 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 ZNF705AQ6ZN79 300 aaPredicted RBP12.27□□□□□ -0.45
PRKN-204ENST00000366896 C20orf144Q9BQM9 153 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 OR2J1Q9GZK6 312 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 KCNIP1Q9NZI2 227 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 SPRR3Q9UBC9 169 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 ZZEF1O43149 2961 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 TMEM30CPA0ZSE6 113 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 YPEL1O60688 119 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 RAMP3O60896 148 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 WISP2O76076 250 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 NPSP0C0P6 89 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 UBE2NP61088 152 aaKnown RBP12.27□□□□□ -0.45
PRKN-204ENST00000366896 SLC35E4Q6ICL7 350 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 LINC01551Q86U37 167 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 Q8NA96 180 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 C5orf30Q96GV9 206 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 YPEL2Q96QA6 119 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 TMEM147Q9BVK8 224 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 CBY1Q9Y3M2 126 aa12.27□□□□□ -0.45
PRKN-204ENST00000366896 A6NNC1 897 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 NXPH2O95156 264 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 LINC00614P0C842 121 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 FOXL1Q12952 345 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 CATR1Q13166 79 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 PMS2P5A8MQ11 134 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 TMPRSS2O15393 492 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 CLDN1O95832 211 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 IRF2P14316 349 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 VWC2Q2TAL6 325 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 OR5T1Q8NG75 326 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 OR1L1Q8NH94 360 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 GALMQ96C23 342 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 SDSLQ96GA7 329 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 CIB3Q96Q77 187 aaPredicted RBP12.26□□□□□ -0.45
PRKN-204ENST00000366896 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.26□□□□□ -0.45
PRKN-204ENST00000366896 TMEM106BQ9NUM4 274 aa12.26□□□□□ -0.45
PRKN-204ENST00000366896 LRRC30A6NM36 301 aa12.25□□□□□ -0.45
PRKN-204ENST00000366896 C11orf94C9JXX5 98 aa12.25□□□□□ -0.45
PRKN-204ENST00000366896 TNFSF13O75888 250 aa12.25□□□□□ -0.45
PRKN-204ENST00000366896 COX5AP20674 150 aa12.25□□□□□ -0.45
PRKN-204ENST00000366896 FFAR4Q5NUL3 377 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms