RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PSMG4Q5JS54 123 aa10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 CUL9Q8IWT3 2517 aa10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 RPL8P62917 257 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 LOC101059948A0A1B0GTJ6 334 aa10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 NEURL1O76050 574 aa10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 MOGAT3Q86VF5 341 aa10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 C1RLQ9NZP8 487 aa10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 TCL1AP56279 114 aa10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 HSPE1P61604 102 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF146Q15072 292 aa10.09□□□□□ -0.79
CDC42BPA-202ENST00000366764 TMPRSS2O15393 492 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 FGF11Q92914 225 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 MRPL18Q9H0U6 180 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 DLL1O00548 723 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 SAP25Q8TEE9 199 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 COL10A1Q03692 680 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 C1QL2Q7Z5L3 287 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 FAM90A1Q86YD7 464 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZNF430Q9H8G1 570 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 PRR33A8MZF0 331 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 RPL31P62899 125 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 CTSBP07858 339 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 STARD6P59095 220 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 PLPPR2Q96GM1 343 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 A0A1W2PR80 420 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 LYZP61626 148 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 RPL11P62913 178 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 GRAMD2BQ96HH9 432 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 FAM90A9PA6NNJ1 464 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 SOX8P57073 446 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 TMEM140Q9NV12 185 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZFP30Q9Y2G7 519 aa10.08□□□□□ -0.8
CDC42BPA-202ENST00000366764 M0R296 226 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 H0YIZ8 118 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 LINC00271P0C7V0 271 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 GATAD1Q8WUU5 269 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 PAQR4Q8N4S7 273 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 Q56UQ5 140 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 GBGT1Q8N5D6 347 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 TMEM251Q8N6I4 163 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 SRXN1Q9BYN0 137 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 S100A4P26447 101 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 DRAM1Q8N682 238 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 CEACAM18A8MTB9 384 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 AHRRA9YTQ3 701 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 PPOXP50336 477 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 WASHC3Q9Y3C0 194 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 ORM1P02763 201 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 CCDC144NLQ6NUI1 221 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 HEPN1Q6WQI6 88 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIGD1AQ9Y241 93 aa10.07□□□□□ -0.8
CDC42BPA-202ENST00000366764 ICAM4Q14773 271 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 SCNM1Q9BWG6 230 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 MSL2Q9HCI7 577 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 FZR1Q9UM11 496 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZNF785A8K8V0 405 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 SNRNP40Q96DI7 357 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 IL36RNQ9UBH0 155 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 COLCA2A8K830 154 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 GAMTQ14353 236 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HES3Q5TGS1 186 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 MMD2Q8IY49 270 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 TCF19Q9Y242 345 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 C8orf88P0DMB2 117 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 GPX4P36969 197 aaPredicted RBP10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 SPATA45Q537H7 98 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 GFRALQ6UXV0 394 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 TRBV24-1A0A075B6N3 115 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 STPG3Q8N7X2 389 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 LOXL4Q96JB6 756 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 RAB1BQ9H0U4 201 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 NCBP2LA6PVI3 153 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BKO60814 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BJP06899 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BOP23527 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BBP33778 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BDP58876 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BCP62807 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST2H2BEQ16778 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 ALKBH6Q3KRA9 238 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 OR8I2Q8N0Y5 310 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BHQ93079 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BNQ99877 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 HIST1H2BMQ99879 126 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 DNAJC4Q9NNZ3 241 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 TFF2Q03403 129 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 SOX21Q9Y651 276 aaPredicted RBP10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 OR4D5Q8NGN0 318 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 PMCHL2Q9BQD1 86 aa10.06□□□□□ -0.8
CDC42BPA-202ENST00000366764 TAS2R60P59551 318 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 MIC13Q5XKP0 118 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 RAB1CQ92928 201 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 OR2T8A6NH00 312 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 C1orf162Q8NEQ5 155 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 TIMP4Q99727 224 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 SDF2L1Q9HCN8 221 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 PRR19A6NJB7 356 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms