RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ZGRF1Q86YA3 2104 aa11.68□□□□□ -0.54
CTR9-201ENST00000361367 C1QTNF9BB2RNN3 333 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 HYPMO75409 117 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 C1QTNF9P0C862 333 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 OR4A5Q8NH83 315 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 SLC25A28Q96A46 364 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 TXN2Q99757 166 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 HEATR5AQ86XA9 2040 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 H2BFSP57053 126 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 SERF2P84101 59 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 H1FOOQ8IZA3 346 aaPredicted RBP11.67□□□□□ -0.54
CTR9-201ENST00000361367 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 PNRC2Q9NPJ4 139 aaKnown RBP11.67□□□□□ -0.54
CTR9-201ENST00000361367 RND2P52198 227 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 SELENOTP62341 195 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 MPDU1O75352 247 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 SCGB1D1O95968 90 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 MBNL2Q5VZF2 373 aaKnown RBP11.67□□□□□ -0.54
CTR9-201ENST00000361367 C2orf16Q68DN1 1984 aa11.67□□□□□ -0.54
CTR9-201ENST00000361367 TFF1P04155 84 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 SMIM17P0DL12 118 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 DYNLRB2Q8TF09 96 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 RSG1Q9BU20 258 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 PXMP4Q9Y6I8 212 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 IGKV1-12A0A0C4DH73 117 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 SCO1O75880 301 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 IGKV1D-12P01611 117 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 CXCL2P19875 107 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 COMPP49747 757 aaPredicted RBP11.66□□□□□ -0.54
CTR9-201ENST00000361367 C16orf82Q7Z2V1 217 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 FAM89BQ8N5H3 189 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 WDR31Q8NA23 367 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 HIGD1AQ9Y241 93 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 TRAV24A0A0B4J272 114 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 TGOLN2O43493 480 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 PAGE4O60829 102 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 LINC00869P0C866 280 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 PAX6P26367 422 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 FXYD3Q14802 87 aa11.66□□□□□ -0.54
CTR9-201ENST00000361367 LYRM2Q9NU23 88 aaPredicted RBP11.66□□□□□ -0.54
CTR9-201ENST00000361367 C5orf63A6NC05 138 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 OSR1Q8TAX0 266 aaPredicted RBP11.65□□□□□ -0.54
CTR9-201ENST00000361367 RBM14Q96PK6 669 aaKnown RBP11.65□□□□□ -0.54
CTR9-201ENST00000361367 VAX2Q9UIW0 290 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 H0Y8G0 127 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 CLDN34H7C241 214 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 CXorf1O96002 111 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 PAFAH1B2P68402 229 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 FHL1Q13642 323 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 C4orf17Q53FE4 359 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.65□□□□□ -0.54
CTR9-201ENST00000361367 TOLLIPQ9H0E2 274 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 NAGKQ9UJ70 344 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 GATCO43716 136 aaKnown RBP11.65□□□□□ -0.54
CTR9-201ENST00000361367 FAM157CP0CG43 387 aa11.65□□□□□ -0.54
CTR9-201ENST00000361367 GOLGB1Q14789 3259 aaKnown RBP11.65□□□□□ -0.54
CTR9-201ENST00000361367 SRRM5B3KS81 715 aa11.65□□□□□ -0.55
CTR9-201ENST00000361367 RGS13O14921 159 aa11.65□□□□□ -0.55
CTR9-201ENST00000361367 REG1AP05451 166 aa11.65□□□□□ -0.55
CTR9-201ENST00000361367 ZP3P21754 424 aa11.65□□□□□ -0.55
CTR9-201ENST00000361367 ZNF672Q499Z4 452 aaPredicted RBP11.65□□□□□ -0.55
CTR9-201ENST00000361367 HSD17B13Q7Z5P4 300 aaPredicted RBP11.65□□□□□ -0.55
CTR9-201ENST00000361367 FAM216AQ8WUB2 273 aa11.65□□□□□ -0.55
CTR9-201ENST00000361367 GTF3AQ92664 365 aaKnown RBP11.65□□□□□ -0.55
CTR9-201ENST00000361367 SPSB4Q96A44 273 aa11.65□□□□□ -0.55
CTR9-201ENST00000361367 OR4C12Q96R67 309 aa11.65□□□□□ -0.55
CTR9-201ENST00000361367 GFI1Q99684 422 aa11.65□□□□□ -0.55
CTR9-201ENST00000361367 SCN8AQ9UQD0 1980 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 KHDC3LQ587J8 217 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 MS4A10Q96PG2 267 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 SPG11Q96JI7 2443 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 TRBV6-7A0A0A0MS04 114 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 C17orf98A8MV24 154 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 NTF3P20783 257 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 UCP1P25874 307 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
CTR9-201ENST00000361367 AUP1Q9Y679 476 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 KIF26AQ9ULI4 1882 aaPredicted RBP11.64□□□□□ -0.55
CTR9-201ENST00000361367 NPIPB11E5RHQ5 1161 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 WISP1O95388 367 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
CTR9-201ENST00000361367 OTX1P32242 354 aaPredicted RBP11.64□□□□□ -0.55
CTR9-201ENST00000361367 GALR1P47211 349 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 MFAP4P55083 255 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 ZP1P60852 638 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 RTN4RL2Q86UN3 420 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 FBXL15Q9H469 300 aa11.64□□□□□ -0.55
CTR9-201ENST00000361367 ZNF430Q9H8G1 570 aaPredicted RBP11.64□□□□□ -0.55
CTR9-201ENST00000361367 HIST1H3AP68431 136 aa11.63□□□□□ -0.55
CTR9-201ENST00000361367 RPRMLQ8N4K4 120 aa11.63□□□□□ -0.55
CTR9-201ENST00000361367 TAF15Q92804 592 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTR9-201ENST00000361367 SPINK4O60575 86 aa11.63□□□□□ -0.55
CTR9-201ENST00000361367 HKR1P10072 659 aa11.63□□□□□ -0.55
CTR9-201ENST00000361367 ZNF146Q15072 292 aa11.63□□□□□ -0.55
CTR9-201ENST00000361367 BSXQ3C1V8 233 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms