RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 FAM166AQ6J272 317 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 LRTM2Q8N967 370 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 HYPMO75409 117 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 IGKV1D-8A0A087WSZ0 117 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 PROB1E7EW31 1015 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 CCL4P13236 92 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 TWIST1Q15672 202 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 ABHD12Q8N2K0 398 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 FSCN3Q9NQT6 498 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 H3BVH4 76 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 BEND2Q8NDZ0 799 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 GUCD1Q96NT3 240 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 C19orf24Q9BVV8 132 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 MTCL1Q9Y4B5 1905 aaKnown RBP11.88□□□□□ -0.51
SMC5-201ENST00000361138 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
SMC5-201ENST00000361138 DEFB109BQ30KR1 87 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 ARL6IP6Q8N6S5 226 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 TMSB15BA0A087X1C1 80 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 ARTNQ5T4W7 220 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 GTF3AQ92664 365 aaKnown RBP11.87□□□□□ -0.51
SMC5-201ENST00000361138 SFXN3Q9BWM7 321 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 SSBP3Q9BWW4 388 aaPredicted RBP11.87□□□□□ -0.51
SMC5-201ENST00000361138 SCN10AQ9Y5Y9 1956 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 PGPA6NDG6 321 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 UCP2P55851 309 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 NIT1Q86X76 327 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 FLVCR1-AS1Q8TAF5 88 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 RND1Q92730 232 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 TSC2P49815 1807 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 COX5BP10606 129 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 HERVK_113P61574 105 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 C10orf91Q5T1B1 145 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 RIPPLY2Q5TAB7 128 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 MRPL32Q9BYC8 188 aaKnown RBP11.87□□□□□ -0.51
SMC5-201ENST00000361138 TTTY12Q9BZ98 90 aa11.87□□□□□ -0.51
SMC5-201ENST00000361138 TMEM136Q6ZRR5 245 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 MBD3L1Q8WWY6 194 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 CCL17Q92583 94 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 NABP2Q9BQ15 211 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 NRN1Q9NPD7 142 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 IGKV3D-11A0A0A0MRZ8 115 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 ODAMA1E959 279 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 HSPE1P61604 102 aaKnown RBP11.86□□□□□ -0.51
SMC5-201ENST00000361138 GCSAMQ8N6F7 178 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 VSIRQ9H7M9 311 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 MGST3O14880 152 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 MUC15Q8N387 334 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 DMRTA2Q96SC8 542 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 TMEM189A5PLL7 270 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 C1QTNF9BB2RNN3 333 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 MT-CO3P00414 261 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 RPL7P18124 248 aaKnown RBP11.86□□□□□ -0.51
SMC5-201ENST00000361138 HBBP68871 147 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMC5-201ENST00000361138 VKORC1L1Q8N0U8 176 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 RALYQ9UKM9 306 aaKnown RBP11.86□□□□□ -0.51
SMC5-201ENST00000361138 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 C1orf194Q5T5A4 169 aa11.86□□□□□ -0.51
SMC5-201ENST00000361138 ZNF430Q9H8G1 570 aaPredicted RBP11.86□□□□□ -0.51
SMC5-201ENST00000361138 ATXN7O15265 892 aaPredicted RBP11.85□□□□□ -0.51
SMC5-201ENST00000361138 GDF9O60383 454 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 IGHV2-70P01814 119 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 OR10AG1Q8NH19 301 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 FAM222BQ8WU58 562 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 TCF19Q9Y242 345 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 C1QTNF9P0C862 333 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 APELAP0DMC3 54 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 CALHM1Q8IU99 346 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 DLEU1O43261 78 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 GCSHP23434 173 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 ACTL10Q5JWF8 245 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 ZNF826PQ6ZT77 177 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 ARRDC1-AS1Q9H2J1 176 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 TNFSF13O75888 250 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 PLAUP00749 431 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 CGAP01215 116 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 COX7A1P24310 79 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 SELENOTP62341 195 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 ID3Q02535 119 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 ZNF146Q15072 292 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 ZNF324BQ6AW86 544 aaPredicted RBP11.85□□□□□ -0.51
SMC5-201ENST00000361138 FAM19A2Q8N3H0 131 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 ST6GALNAC6Q969X2 333 aa11.85□□□□□ -0.51
SMC5-201ENST00000361138 MRPL13Q9BYD1 178 aaKnown RBP11.85□□□□□ -0.51
SMC5-201ENST00000361138 TRAV17A0A0B4J275 112 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 IGKV1D-13A0A0B4J2D9 117 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 IGKV1-13P0DP09 117 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 KIR2DL2P43627 348 aaPredicted RBP11.84□□□□□ -0.51
SMC5-201ENST00000361138 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 THYN1Q9P016 225 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 CEACAM1P13688 526 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 JPT1Q9UK76 154 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 TRAV1-1A0A0B4J248 108 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 RRHO14718 337 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 GNG7O60262 68 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 LIPFP07098 398 aa11.84□□□□□ -0.51
SMC5-201ENST00000361138 TIMP4Q99727 224 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms