RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 KLF4O43474 513 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 CTSSP25774 331 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 NUTF2P61970 127 aaKnown RBP11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 ZNF721Q8TF20 911 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 G6PC2Q9NQR9 355 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 IGHV3-72A0A0B4J1Y9 119 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 SS18L1O75177 396 aaPredicted RBP11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 TMEM50AO95807 157 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 PEBP1P30086 187 aaKnown RBP11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 MPV17P39210 176 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 GPR6P46095 362 aaPredicted RBP11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 SPRED2Q7Z698 418 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 KIR2DL4Q99706 377 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 MOB4Q9Y3A3 225 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 LINC00614P0C842 121 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 COL9A1P20849 921 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 LOXL3P58215 753 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 TBR1Q16650 682 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 PRSS53Q2L4Q9 553 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 ZNF658BQ4V348 819 aaPredicted RBP11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 BEND2Q8NDZ0 799 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST1H2BLQ99880 126 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 FOXC2Q99958 501 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 GEMIN7Q9H840 131 aaKnown RBP11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 CD3EP07766 207 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 SOX8P57073 446 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 FBXW9Q5XUX1 488 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 ARRDC1-AS1Q9H2J1 176 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 DLEU1O43261 78 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 MC5RP33032 325 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 ADMP35318 185 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 CKS1BP61024 79 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 RPL23P62829 140 aaKnown RBP11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 MRAP2Q96G30 205 aa11.49□□□□□ -0.57
CCDC144A-203ENST00000360495 PGPEP1LA6NFU8 196 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 C2CD4DB7Z1M9 353 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 NDUFS6O75380 124 aaKnown RBP11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 IL6RP08887 468 aaPredicted RBP11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 TRAV9-2A0A087WT02 112 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 NGFRP08138 427 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 ATP5G3P48201 142 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 ACSF3Q4G176 576 aaPredicted RBP11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 RIPPLY2Q5TAB7 128 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 NHP2Q9NX24 153 aaKnown RBP11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 RP1L1Q8IWN7 2480 aaPredicted RBP11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 ATP5LO75964 103 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 SLC25A47Q6Q0C1 308 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 METTL26Q96S19 204 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 LHFPL6Q9Y693 200 aa11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 GPX4P36969 197 aaPredicted RBP11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 COL16A1Q07092 1604 aaPredicted RBP11.48□□□□□ -0.57
CCDC144A-203ENST00000360495 PSMG4Q5JS54 123 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 OR13C6PQ8NH95 151 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 CCL13Q99616 98 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 PLA2G2FQ9BZM2 168 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 A0A1W2PQM1 296 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 FOXS1O43638 330 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 CGAP01215 116 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 CCDC144NLQ6NUI1 221 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 LHX9Q9NQ69 397 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 A0A0G2JK05 382 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 DMRTA2Q96SC8 542 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 ZNHIT1O43257 154 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 ICAM4Q14773 271 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 LINC01590Q5TEZ4 76 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 LRTM2Q8N967 370 aa11.47□□□□□ -0.57
CCDC144A-203ENST00000360495 A0A0J9YW62 118 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 TMEM229AB2RXF0 380 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 NXPH1P58417 271 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 LILRA6Q6PI73 481 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 TMEM92Q6UXU6 159 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 HEPN1Q6WQI6 88 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 VKORC1L1Q8N0U8 176 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 HIST3H2BBQ8N257 126 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 NUDT10Q8NFP7 164 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 DYNLRB2Q8TF09 96 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 PPIAL4EA0A075B759 164 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 PPIAL4FP0DN26 164 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 DRAM1Q8N682 238 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 OR2K2Q8NGT1 345 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 PPIAL4AQ9Y536 164 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 TRPM3Q9HCF6 1732 aaPredicted RBP11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 RREB1Q92766 1687 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 TFF3Q07654 80 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 SLC25A53Q5H9E4 307 aa11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.57
CCDC144A-203ENST00000360495 IGKV3D-11A0A0A0MRZ8 115 aa11.46□□□□□ -0.58
CCDC144A-203ENST00000360495 IGKV3-11P04433 115 aa11.46□□□□□ -0.58
CCDC144A-203ENST00000360495 C19orf48Q6RUI8 117 aa11.46□□□□□ -0.58
CCDC144A-203ENST00000360495 OR4X2Q8NGF9 303 aa11.46□□□□□ -0.58
CCDC144A-203ENST00000360495 CT55Q8WUE5 264 aa11.46□□□□□ -0.58
CCDC144A-203ENST00000360495 NPIPB3Q92617 1050 aa11.46□□□□□ -0.58
CCDC144A-203ENST00000360495 BTCP35070 178 aa11.46□□□□□ -0.58
CCDC144A-203ENST00000360495 ZNF826PQ6ZT77 177 aa11.46□□□□□ -0.58
CCDC144A-203ENST00000360495 A0A1B0GUT8 65 aa11.45□□□□□ -0.58
CCDC144A-203ENST00000360495 C10orf128Q5T292 105 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms