RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 GGTLC2Q14390 218 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 CEACAM21Q3KPI0 293 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 MIC13Q5XKP0 118 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 TLNRD1Q9H1K6 362 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 ST6GALNAC2Q9UJ37 374 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 ASAH2BP0C7U1 165 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 MYOGP15173 224 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 DUX5Q96PT3 197 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 YAE1D1Q9NRH1 226 aa8.04□□□□□ -1.12
VPS13A-203ENST00000360280 PLA2G10O15496 165 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 IGHV3OR15-7A0A075B7D8 119 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 A0A1B0GUT8 65 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 SCGB3A1Q96QR1 104 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 PTP4A3O75365 173 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 STARD6P59095 220 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 MSRB3Q8IXL7 192 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 FGF12P61328 243 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 RNF182Q8N6D2 247 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 OR4X2Q8NGF9 303 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 CLDND2Q8NHS1 167 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 C14orf144Q96I85 54 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 LY75O60449 1722 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 LRRK1Q38SD2 2015 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 C21orf140B9A014 251 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 VEGFBP49765 207 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 GPBAR1Q8TDU6 330 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 WNT10AQ9GZT5 417 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 SLC25A15Q9Y619 301 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 ZNF562Q6V9R5 426 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 SYNGR3O43761 229 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 RND3P61587 244 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 TMEM106BQ9NUM4 274 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 SF3B6Q9Y3B4 125 aaKnown RBP8.03□□□□□ -1.12
VPS13A-203ENST00000360280 TFPI2P48307 235 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 DOCK7Q96N67 2140 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 ODAMA1E959 279 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 ZNF205O95201 554 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 HOXD4P09016 255 aaPredicted RBP8.03□□□□□ -1.12
VPS13A-203ENST00000360280 NPIPB4C9JG80 1138 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 FBXW9Q5XUX1 488 aa8.03□□□□□ -1.12
VPS13A-203ENST00000360280 ORMDL3Q8N138 153 aa8.02□□□□□ -1.12
VPS13A-203ENST00000360280 TMEM171Q8WVE6 324 aa8.02□□□□□ -1.12
VPS13A-203ENST00000360280 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.12
VPS13A-203ENST00000360280 TIMM23BQ5SRD1 257 aa8.02□□□□□ -1.12
VPS13A-203ENST00000360280 CBLN3Q6UW01 205 aa8.02□□□□□ -1.12
VPS13A-203ENST00000360280 MEGF9Q9H1U4 602 aa8.02□□□□□ -1.12
VPS13A-203ENST00000360280 KBTBD11-OT1A0A1B0GTJ5 212 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 PF4V1P10720 104 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 GOLT1AQ6ZVE7 132 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 CYSLTR1Q9Y271 337 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 A0A087WWC5 75 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 TRAV12-3A0A0B4J271 114 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 ZNF688P0C7X2 276 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 TDHQ8IZJ6 230 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 CIARTQ8N365 385 aaPredicted RBP8.02□□□□□ -1.13
VPS13A-203ENST00000360280 EEF1AKMT3Q96AZ1 226 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 SFXN3Q9BWM7 321 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 GSN-AS1Q9NRJ2 163 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 IGHV4-39P01824 125 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 NHLRC3Q5JS37 347 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 CRYBB3P26998 211 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 RASL10BQ96S79 203 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 MAGEA5P43359 124 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 NDUFA2O43678 99 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 PATE4P0C8F1 98 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 DOCK3Q8IZD9 2030 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 ATP5G2Q06055 141 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 PLAUP00749 431 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 CTSSP25774 331 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 TBR1Q16650 682 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 TP53I13Q8NBR0 393 aaPredicted RBP8.02□□□□□ -1.13
VPS13A-203ENST00000360280 ZNF658BQ4V348 819 aaPredicted RBP8.02□□□□□ -1.13
VPS13A-203ENST00000360280 SOX8P57073 446 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 HMGCLL1Q8TB92 370 aa8.02□□□□□ -1.13
VPS13A-203ENST00000360280 METTL12A8MUP2 240 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 MGST3O14880 152 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 TNFSF14O43557 240 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 PRF1P14222 555 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 LINC01555Q8NAE3 123 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 ZNF488Q96MN9 340 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 THY1P04216 161 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 NXT2Q9NPJ8 142 aaKnown RBP8.01□□□□□ -1.13
VPS13A-203ENST00000360280 ZNF257Q9Y2Q1 563 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 ZNF585BQ52M93 769 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 DCAF12L2Q5VW00 463 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 MARF1Q9Y4F3 1742 aaKnown RBP8.01□□□□□ -1.13
VPS13A-203ENST00000360280 EFNB2P52799 333 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 KIAA1644Q3SXP7 199 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 TMEM252Q8N6L7 170 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 IL36BQ9NZH7 164 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 C1QL1O75973 258 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 PRSS12P56730 875 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 LAMTOR2Q9Y2Q5 125 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 A8MWV9 139 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 LGALS1P09382 135 aaKnown RBP8.01□□□□□ -1.13
VPS13A-203ENST00000360280 GPR146Q96CH1 333 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 WDR54Q9H977 334 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 HILPDAQ9Y5L2 63 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 LINC00614P0C842 121 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 S100A7L2Q5SY68 101 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms