RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SAPCD1Q5SSQ6 148 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 SIGIRRQ6IA17 410 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 UCN2Q96RP3 112 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 HIST1H4GQ99525 98 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 IDI2-AS1Q9NZ38 188 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 UQCR10Q9UDW1 63 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 LYZL2Q7Z4W2 148 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 TMEM222Q9H0R3 208 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 ST6GALNAC2Q9UJ37 374 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 IGKV3-7A0A075B6H7 116 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 TM4SF5O14894 197 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 PTGDSP41222 190 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 PLAURQ03405 335 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 IRF3Q14653 427 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 OR51G1Q8NGK1 321 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 ZCCHC14Q8WYQ9 949 aaKnown RBP8.36□□□□□ -1.07
CUX1-203ENST00000360264 SLC6A13Q9NSD5 602 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 TMEM229AB2RXF0 380 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 FTH1P19P0C7X4 201 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 TNFRSF9Q07011 255 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 MSRB3Q8IXL7 192 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 OPN3Q9H1Y3 402 aaPredicted RBP8.36□□□□□ -1.07
CUX1-203ENST00000360264 SPAARA0A1B0GVQ0 90 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 HSPE1P61604 102 aaKnown RBP8.36□□□□□ -1.07
CUX1-203ENST00000360264 CENPVQ7Z7K6 275 aaPredicted RBP8.36□□□□□ -1.07
CUX1-203ENST00000360264 AQP10Q96PS8 301 aa8.36□□□□□ -1.07
CUX1-203ENST00000360264 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.36□□□□□ -1.07
CUX1-203ENST00000360264 PRR19A6NJB7 356 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 TFF2Q03403 129 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 PXMP4Q9Y6I8 212 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 PGLYRP1O75594 196 aaPredicted RBP8.35□□□□□ -1.07
CUX1-203ENST00000360264 GPR82Q96P67 336 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 COL18A1P39060 1754 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 FOXS1O43638 330 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 SPSB4Q96A44 273 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 VCX2Q9H322 139 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 ANOS1P23352 680 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 ZNF56Q15929 161 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 NUDT10Q8NFP7 164 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 WNT5BQ9H1J7 359 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 DCAF12L2Q5VW00 463 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 SDF2L1Q9HCN8 221 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 VWA8A3KMH1 1905 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 ADAP1O75689 374 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 C1QAP02745 245 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 AMER3Q8N944 861 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 MEX3AA1L020 520 aaKnown RBP8.35□□□□□ -1.07
CUX1-203ENST00000360264 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 PRSS23O95084 383 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 CYB561D1Q8N8Q1 229 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 OR10AG1Q8NH19 301 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 LHFPL5Q8TAF8 219 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 ITLN1Q8WWA0 313 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 JKAMPQ9P055 326 aa8.35□□□□□ -1.07
CUX1-203ENST00000360264 GAGE10A6NGK3 116 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 CACNG7P62955 275 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 TTC32Q5I0X7 151 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 TMEM101Q96IK0 257 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 LOC390937A0A1W2PQ73 354 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 MARCH11A6NNE9 402 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 PTP4A3O75365 173 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 IGHMP01871 453 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 SLC16A13Q7RTY0 426 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 FOLR2P14207 255 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 C7orf77A4D0Y5 90 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 RND2P52198 227 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 PSG4Q00888 419 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 TMEM136Q6ZRR5 245 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 SLC25A17O43808 307 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 C10orf111Q8N326 155 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 CLEC7AQ9BXN2 247 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 G6PC2Q9NQR9 355 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 ASIPP42127 132 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 SPATA45Q537H7 98 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 LINC00470Q9BZP3 86 aa8.34□□□□□ -1.07
CUX1-203ENST00000360264 A0A1B0GW15 77 aa8.34□□□□□ -1.08
CUX1-203ENST00000360264 VSIG8P0DPA2 414 aa8.34□□□□□ -1.08
CUX1-203ENST00000360264 ZNF146Q15072 292 aa8.34□□□□□ -1.08
CUX1-203ENST00000360264 TAF15Q92804 592 aaKnown RBP eCLIP8.34□□□□□ -1.08
CUX1-203ENST00000360264 CCL27Q9Y4X3 112 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 H7C2G1 150 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 LNP1A1A4G5 178 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 UPK3AO75631 287 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 RTN4RL2Q86UN3 420 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 PGLYRP4Q96LB8 373 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 SLC25A20O43772 301 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 TFPI2P48307 235 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 ZNF880Q6PDB4 577 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 MRPS18BQ9Y676 258 aaKnown RBP8.33□□□□□ -1.08
CUX1-203ENST00000360264 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 TMEM262E9PQX1 116 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 FCARP24071 287 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 APOBEC3AP31941 199 aaPredicted RBP8.33□□□□□ -1.08
CUX1-203ENST00000360264 SRSF5Q13243 272 aaKnown RBP8.33□□□□□ -1.08
CUX1-203ENST00000360264 C1orf162Q8NEQ5 155 aaPredicted RBP8.33□□□□□ -1.08
CUX1-203ENST00000360264 ZNF488Q96MN9 340 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 HRKO00198 91 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 ATXN7O15265 892 aaPredicted RBP8.33□□□□□ -1.08
CUX1-203ENST00000360264 ARL14EPLP0DKL9 152 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 OVCH2Q7RTZ1 564 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms