RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 INSIG2Q9Y5U4 225 aa18.76■□□□□ 0.59
SDF4-202ENST00000360001 FAM90A9PA6NNJ1 464 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 H7C2Y5 167 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 HKR1P10072 659 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 USF1P22415 310 aaPredicted RBP18.75■□□□□ 0.59
SDF4-202ENST00000360001 SLA2Q9H6Q3 261 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 CHST1O43916 411 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 HRASP01112 189 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 GAPDHP04406 335 aaKnown RBP18.75■□□□□ 0.59
SDF4-202ENST00000360001 HTR1DP28221 377 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 NUP62P37198 522 aaPredicted RBP18.75■□□□□ 0.59
SDF4-202ENST00000360001 PDPNQ86YL7 162 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 PDZD9Q8IXQ8 264 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 RPEQ96AT9 228 aa18.75■□□□□ 0.59
SDF4-202ENST00000360001 A0A096LNT2 108 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 IGHV1-3A0A0C4DH29 117 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 SRRM4A7MD48 611 aaKnown RBP18.74■□□□□ 0.59
SDF4-202ENST00000360001 FAM90A26D6RGX4 464 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 TMEM50AO95807 157 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 P2RY1P47900 373 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 TMEM177Q53S58 311 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 OSR1Q8TAX0 266 aaPredicted RBP18.74■□□□□ 0.59
SDF4-202ENST00000360001 LHX4Q969G2 390 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 HSPB7Q9UBY9 170 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 WASHC3Q9Y3C0 194 aa18.74■□□□□ 0.59
SDF4-202ENST00000360001 WRBO00258 174 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 TXNL1O43396 289 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 RPL12P30050 165 aaKnown RBP18.73■□□□□ 0.59
SDF4-202ENST00000360001 ARHGDIBP52566 201 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 TPTE2P1Q5T6R2 138 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 OR4A47Q6IF82 309 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 MBD6Q96DN6 1003 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 DPM3Q9P2X0 92 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 TRAV3A0A0B4J244 114 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 PVALBP20472 110 aaPredicted RBP18.73■□□□□ 0.59
SDF4-202ENST00000360001 MC5RP33032 325 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 PAX8Q06710 450 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 TNFRSF9Q07011 255 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 AARDQ4LEZ3 155 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 LHFPL4Q7Z7J7 247 aa18.73■□□□□ 0.59
SDF4-202ENST00000360001 FLYWCH2Q96CP2 140 aaKnown RBP18.73■□□□□ 0.59
SDF4-202ENST00000360001 A0A1W2PRD5 423 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 A0A1W2PRF3 423 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 A0A1W2PRM7 423 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 LEUTXA8MZ59 168 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 SYNGR2O43760 224 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 RAB13P51153 203 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 PAX9P55771 341 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 RELBQ01201 579 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 OR4C13Q8NGP0 309 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 IGHV3-72A0A0B4J1Y9 119 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 A0A1W2PPI3 338 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 RGS13O14921 159 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 SHOXO15266 292 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 BCL2L11O43521 198 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 IL6RP08887 468 aaPredicted RBP18.72■□□□□ 0.59
SDF4-202ENST00000360001 OR2B8PP59922 312 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 HARBI1Q96MB7 349 aa18.72■□□□□ 0.59
SDF4-202ENST00000360001 QTRT1Q9BXR0 403 aaKnown RBP18.72■□□□□ 0.59
SDF4-202ENST00000360001 RBMXL2O75526 392 aaKnown RBP18.71■□□□□ 0.59
SDF4-202ENST00000360001 UBE2KP61086 200 aa18.71■□□□□ 0.59
SDF4-202ENST00000360001 VAMP2P63027 116 aa18.71■□□□□ 0.59
SDF4-202ENST00000360001 RAB40CQ96S21 281 aa18.71■□□□□ 0.59
SDF4-202ENST00000360001 KANTRA0A1W2PQU2 76 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 MSMBP08118 114 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 CEACAM3P40198 252 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 GPR157Q5UAW9 335 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 MOB3BQ86TA1 216 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 OR2C3Q8N628 320 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 OR4A16Q8NH70 328 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 C1orf159Q96HA4 380 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 AIFM2Q9BRQ8 373 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 RBKSQ9H477 322 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 LYRM2Q9NU23 88 aaPredicted RBP18.7■□□□□ 0.58
SDF4-202ENST00000360001 GPR137BO60478 399 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 UBE2E1P51965 193 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 MS4A7Q9GZW8 240 aaPredicted RBP18.7■□□□□ 0.58
SDF4-202ENST00000360001 HILPDAQ9Y5L2 63 aa18.7■□□□□ 0.58
SDF4-202ENST00000360001 FAM24AA6NFZ4 105 aa18.69■□□□□ 0.58
SDF4-202ENST00000360001 SAA1P0DJI8 122 aaPredicted RBP18.69■□□□□ 0.58
SDF4-202ENST00000360001 IAPPP10997 89 aa18.69■□□□□ 0.58
SDF4-202ENST00000360001 Q5PR19 223 aa18.69■□□□□ 0.58
SDF4-202ENST00000360001 TEX261Q6UWH6 196 aa18.69■□□□□ 0.58
SDF4-202ENST00000360001 ARPC5LQ9BPX5 153 aa18.69■□□□□ 0.58
SDF4-202ENST00000360001 ZC4H2Q9NQZ6 224 aa18.69■□□□□ 0.58
SDF4-202ENST00000360001 U3KQ87 197 aa18.69■□□□□ 0.58
SDF4-202ENST00000360001 C15orf61A6NNL5 157 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 B4DSR2 109 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 CAV2P51636 162 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 RPS16P62249 146 aaKnown RBP18.68■□□□□ 0.58
SDF4-202ENST00000360001 MINOS1Q5TGZ0 78 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 SLC51BQ86UW2 128 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 PUSL1Q8N0Z8 303 aaKnown RBP18.68■□□□□ 0.58
SDF4-202ENST00000360001 RITA1Q96K30 269 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 WSB1Q9Y6I7 421 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 MINOS1-NBL1R4GNA1 71 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 TET2Q6N021 2002 aaPredicted RBP18.68■□□□□ 0.58
SDF4-202ENST00000360001 IGSF23A1L1A6 192 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 MED6O75586 246 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 CFDP00746 253 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms