RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NABP2Q9BQ15 211 aa13.74□□□□□ -0.21
COL18A1-203ENST00000359759 ITGB4P16144 1822 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 APOHP02749 345 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-203ENST00000359759 GLI3P10071 1580 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 RREB1Q92766 1687 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 GCHFRP30047 84 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 FAM106AQ4KMX7 169 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 ZNF658BQ4V348 819 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-203ENST00000359759 NPIPB3Q92617 1050 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 TOMM7Q9P0U1 55 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 RSPO4Q2I0M5 234 aaPredicted RBP13.73□□□□□ -0.21
COL18A1-203ENST00000359759 OR5AN1Q8NGI8 311 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 DANCRP0C864 163 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 IFITM2Q01629 132 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 SLC25A38Q96DW6 304 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 WFDC6Q9BQY6 131 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 PLSCR2Q9NRY7 297 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 IGHV1-45A0A0A0MS14 117 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 OR11H12B2RN74 326 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 OR11H1Q8NG94 326 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 OR11H2Q8NH07 326 aa13.73□□□□□ -0.21
COL18A1-203ENST00000359759 RNASEH2CQ8TDP1 164 aaKnown RBP13.73□□□□□ -0.21
COL18A1-203ENST00000359759 TRBV5-5A0A0J9YX44 114 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 NPFFR1Q9GZQ6 430 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 PPIAL4CA0A0B4J2A2 164 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 PPIAL4GP0DN37 164 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 ICAM4Q14773 271 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 ZNF815PA8K554 130 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 ACSF3Q4G176 576 aaPredicted RBP13.72□□□□□ -0.21
COL18A1-203ENST00000359759 TMEM101Q96IK0 257 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 ALKBH7Q9BT30 221 aaPredicted RBP13.72□□□□□ -0.21
COL18A1-203ENST00000359759 DCTN5Q9BTE1 182 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 HSPE1P61604 102 aaKnown RBP13.72□□□□□ -0.21
COL18A1-203ENST00000359759 WDR82Q6UXN9 313 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 FAM19A2Q8N3H0 131 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 DERL1Q9BUN8 251 aa13.72□□□□□ -0.21
COL18A1-203ENST00000359759 LOC101059948A0A1B0GTJ6 334 aa13.71□□□□□ -0.21
COL18A1-203ENST00000359759 DXOO77932 396 aaKnown RBP13.71□□□□□ -0.21
COL18A1-203ENST00000359759 TMEM187Q14656 261 aa13.71□□□□□ -0.21
COL18A1-203ENST00000359759 TRBV9A0A0B4J1U6 114 aa13.71□□□□□ -0.21
COL18A1-203ENST00000359759 STAG3L3P0CL85 134 aa13.71□□□□□ -0.21
COL18A1-203ENST00000359759 PRELID3AQ96N28 172 aa13.71□□□□□ -0.21
COL18A1-203ENST00000359759 ODAMA1E959 279 aa13.71□□□□□ -0.21
COL18A1-203ENST00000359759 CEACAM4O75871 244 aa13.71□□□□□ -0.21
COL18A1-203ENST00000359759 ZNF638Q14966 1978 aaKnown RBP13.71□□□□□ -0.21
COL18A1-203ENST00000359759 TRAV24A0A0B4J272 114 aa13.71□□□□□ -0.22
COL18A1-203ENST00000359759 SCGB3A1Q96QR1 104 aa13.71□□□□□ -0.22
COL18A1-203ENST00000359759 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.22
COL18A1-203ENST00000359759 NPPCP23582 126 aa13.71□□□□□ -0.22
COL18A1-203ENST00000359759 SCN1AP35498 2009 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 TRAV30A0A087WSZ9 112 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 SCO2A0A1W2PP80 73 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 SAA1P0DJI8 122 aaPredicted RBP13.7□□□□□ -0.22
COL18A1-203ENST00000359759 PRSS53Q2L4Q9 553 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 RPL39P5Q59GN2 51 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 CENPVQ7Z7K6 275 aaPredicted RBP13.7□□□□□ -0.22
COL18A1-203ENST00000359759 NIT1Q86X76 327 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 EEF1AKMT3Q96AZ1 226 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 TXNDC17Q9BRA2 123 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 SPCS1Q9Y6A9 102 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 CGAP01215 116 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 LIMS1P48059 325 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 A0A1W2PQM1 296 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 CRYBA2P53672 197 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 RIPPLY3P57055 190 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 TNFRSF18Q9Y5U5 241 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 TFF3Q07654 80 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 FUT5Q11128 374 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 NHLRC3Q5JS37 347 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 PCSK4Q6UW60 755 aa13.7□□□□□ -0.22
COL18A1-203ENST00000359759 COX6B1P14854 86 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 FAM214BQ7L5A3 538 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 TCF19Q9Y242 345 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 TRBV7-9A0A0J9YWB2 115 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 NGFRP08138 427 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 TNFSF10P50591 281 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 PNKDQ8N490 385 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 NUP214P35658 2090 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-203ENST00000359759 IL6RP08887 468 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-203ENST00000359759 LHFPL6Q9Y693 200 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-203ENST00000359759 RNASE4P34096 147 aaKnown RBP13.69□□□□□ -0.22
COL18A1-203ENST00000359759 SNRPD3P62318 126 aaKnown RBP13.69□□□□□ -0.22
COL18A1-203ENST00000359759 SLC25A47Q6Q0C1 308 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 FAM206AQ9NX38 181 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 SCN7AQ01118 1682 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 IGHV3OR16-8A0A075B7F1 116 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 CYP2G1PQ6ZSU1 146 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 AICDAQ9GZX7 198 aa13.69□□□□□ -0.22
COL18A1-203ENST00000359759 FNDC4Q9H6D8 234 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-203ENST00000359759 GCM2O75603 506 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-203ENST00000359759 SHISA5Q8N114 240 aa13.68□□□□□ -0.22
COL18A1-203ENST00000359759 C2orf88Q9BSF0 95 aa13.68□□□□□ -0.22
COL18A1-203ENST00000359759 C11orf68Q9H3H3 251 aaKnown RBP13.68□□□□□ -0.22
COL18A1-203ENST00000359759 WDR54Q9H977 334 aa13.68□□□□□ -0.22
COL18A1-203ENST00000359759 PEX7O00628 323 aa13.68□□□□□ -0.22
COL18A1-203ENST00000359759 TSPOP30536 169 aa13.68□□□□□ -0.22
COL18A1-203ENST00000359759 CD69Q07108 199 aa13.68□□□□□ -0.22
COL18A1-203ENST00000359759 SAMD13Q5VXD3 122 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms