RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
UBAP1-202ENST00000359544 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
UBAP1-202ENST00000359544 GNB1LQ9BYB4 327 aa12.54□□□□□ -0.4
UBAP1-202ENST00000359544 IGLV3-12A0A075B6K2 115 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 PMS2P5A8MQ11 134 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 SNURFLB1AK76 121 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 PPBPP02775 128 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 REG1AP05451 166 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 B4GALT1P15291 398 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 CEACAM8P31997 349 aaPredicted RBP12.53□□□□□ -0.4
UBAP1-202ENST00000359544 AMTP48728 403 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 LGALS4P56470 323 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 ITPR1Q14643 2758 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 C20orf204Q6ZNR8 217 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 SMIM15Q7Z3B0 74 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 MCEMP1Q8IX19 187 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 OR5B3Q8NH48 314 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 IL1F10Q8WWZ1 152 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 A0A1W2PPV4 95 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 F2Z2F3 143 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 MT-ND6P03923 174 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 RPEL1Q2QD12 228 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 LYG1Q8N1E2 194 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 OR4C5Q8NGB2 326 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
UBAP1-202ENST00000359544 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 SF3B5Q9BWJ5 86 aaKnown RBP12.53□□□□□ -0.4
UBAP1-202ENST00000359544 FGF21Q9NSA1 209 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 OR1A1Q9P1Q5 309 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 IL36RNQ9UBH0 155 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 CDC42EP3Q9UKI2 254 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 RNF114Q9Y508 228 aa12.53□□□□□ -0.4
UBAP1-202ENST00000359544 SEC16AO15027 2179 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 PATE4P0C8F1 98 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 IER3P46695 156 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 GPM6AP51674 278 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 FBLN7Q53RD9 439 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 WDR73Q6P4I2 378 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.4
UBAP1-202ENST00000359544 OR5A2Q8NGI9 324 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 OR1L1Q8NH94 360 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 GNB4Q9HAV0 340 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 MTCH1Q9NZJ7 389 aa12.52□□□□□ -0.4
UBAP1-202ENST00000359544 TRBV20OR9-2A0A075B6H5 130 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 LOC105371242A0A075B767 164 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 IGHV2OR16-5A0A0B4J2B6 119 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 IGHV2-70DA0A0C4DH43 119 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 COX19Q49B96 90 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 KRTCAP3Q53RY4 240 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 PRAMEF20Q5VT98 475 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 RAET1LQ5VY80 246 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 MOB1BQ7L9L4 216 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 OCC1Q8TAD7 63 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 C1QTNF5Q9BXJ0 243 aa12.52□□□□□ -0.41
UBAP1-202ENST00000359544 URB1O60287 2271 aaKnown RBP12.52□□□□□ -0.41
UBAP1-202ENST00000359544 TSPOP30536 169 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 SRSF6Q13247 344 aaKnown RBP12.51□□□□□ -0.41
UBAP1-202ENST00000359544 CEACAM21Q3KPI0 293 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 OR56B2PQ8NGI1 322 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 CLN8Q9UBY8 286 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 FER1L5A0AVI2 2057 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 RTTNQ86VV8 2226 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 AHCTF1Q8WYP5 2266 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 DPRXA6NFQ7 191 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 C9orf172C9J069 976 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 SH2D1BO14796 132 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 NXPH2O95156 264 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 TNFSF4P23510 183 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 THBS3P49746 956 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 PRRX1P54821 245 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 HTD2P86397 168 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 RNF151Q2KHN1 245 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 C19orf35Q6ZS72 473 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 KMT5CQ86Y97 462 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 PNKDQ8N490 385 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 FOXB1Q99853 325 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 SFXN3Q9BWM7 321 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.51□□□□□ -0.41
UBAP1-202ENST00000359544 LY96Q9Y6Y9 160 aa12.51□□□□□ -0.41
UBAP1-202ENST00000359544 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 WDR1O75083 606 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 HINT1P49773 126 aaPredicted RBP12.5□□□□□ -0.41
UBAP1-202ENST00000359544 UNQ5815/PRO19632Q6UWF5 114 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 TMEM204Q9BSN7 226 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 CHCHD2Q9Y6H1 151 aaPredicted RBP12.5□□□□□ -0.41
UBAP1-202ENST00000359544 ZNF324O75467 553 aaPredicted RBP12.5□□□□□ -0.41
UBAP1-202ENST00000359544 DEFA4P12838 97 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 BPIFB3P59826 476 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 PMCHL1Q16048 86 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 DCAF12Q5T6F0 453 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 DEFB126Q9BYW3 111 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 ATMQ13315 3056 aa12.5□□□□□ -0.41
UBAP1-202ENST00000359544 TRAV30A0A087WSZ9 112 aa12.49□□□□□ -0.41
UBAP1-202ENST00000359544 IGHV2-26A0A0B4J1V2 119 aa12.49□□□□□ -0.41
UBAP1-202ENST00000359544 TRAV38-1A0A0B4J264 116 aa12.49□□□□□ -0.41
UBAP1-202ENST00000359544 TRAV34A0A0B4J273 112 aa12.49□□□□□ -0.41
UBAP1-202ENST00000359544 IGHV1-69-2A0A0G2JMI3 117 aa12.49□□□□□ -0.41
UBAP1-202ENST00000359544 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms