RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 TMEM88Q6PEY1 159 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 CENPVQ7Z7K6 275 aaPredicted RBP12.27□□□□□ -0.44
GABPB1-202ENST00000359031 TGIF2LYQ8IUE0 185 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 CBLN2Q8IUK8 224 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 DMRTC2Q8IXT2 367 aaPredicted RBP12.27□□□□□ -0.44
GABPB1-202ENST00000359031 OR10P1Q8NGE3 313 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 OR4A16Q8NH70 328 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 SFT2D1Q8WV19 159 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 ZDHHC16Q969W1 377 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 CLCC1Q96S66 551 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 UNKLQ9H9P5 680 aaKnown RBP12.27□□□□□ -0.44
GABPB1-202ENST00000359031 SLC25A10Q9UBX3 287 aaPredicted RBP12.27□□□□□ -0.44
GABPB1-202ENST00000359031 NDRG3Q9UGV2 375 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.44
GABPB1-202ENST00000359031 PPIAL4AQ9Y536 164 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 USF3Q68DE3 2245 aa12.27□□□□□ -0.45
GABPB1-202ENST00000359031 TLN1Q9Y490 2541 aaKnown RBP12.27□□□□□ -0.45
GABPB1-202ENST00000359031 TMPRSS2O15393 492 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 NDUFB7P17568 137 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 NFYBP25208 207 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 RPP30P78346 268 aaKnown RBP12.26□□□□□ -0.45
GABPB1-202ENST00000359031 CCL20P78556 96 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 MRPS11P82912 194 aaKnown RBP12.26□□□□□ -0.45
GABPB1-202ENST00000359031 KLRB1Q12918 225 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 EFNB3Q15768 340 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 ZNF506Q5JVG8 444 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 RNASE6Q93091 150 aaKnown RBP12.26□□□□□ -0.45
GABPB1-202ENST00000359031 ZNF251Q9BRH9 671 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 DYNLRB1Q9NP97 96 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 TMEM106BQ9NUM4 274 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 CACNA1DQ01668 2161 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 E7EQL1 145 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 IGHV3-7P01780 117 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 ARG1P05089 322 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 CD3EP07766 207 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 OR2B8PP59922 312 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 GNB2P62879 340 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 SLC25A48Q6ZT89 311 aaKnown RBP12.26□□□□□ -0.45
GABPB1-202ENST00000359031 LYG1Q8N1E2 194 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 ST6GALNAC3Q8NDV1 305 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 MBD3L1Q8WWY6 194 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 LEAP2Q969E1 77 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 RPRMQ9NS64 109 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 TMEM140Q9NV12 185 aa12.26□□□□□ -0.45
GABPB1-202ENST00000359031 HCFC1P51610 2035 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 IFNA17P01571 189 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 HSPB1P04792 205 aaKnown RBP12.25□□□□□ -0.45
GABPB1-202ENST00000359031 DAOP14920 347 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 UTF1Q5T230 341 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 ZNF429Q86V71 674 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 CLDND2Q8NHS1 167 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 MS4A5Q9H3V2 200 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 SMCO4Q9NRQ5 59 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 BSNQ9UPA5 3926 aa12.25□□□□□ -0.45
GABPB1-202ENST00000359031 A0A1W2PPE3 182 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 C15orf62A8K5M9 175 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 PAX6P26367 422 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 CHRNB4P30926 498 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 APOBEC3AP31941 199 aaPredicted RBP12.24□□□□□ -0.45
GABPB1-202ENST00000359031 GNG10P50151 68 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 RELBQ01201 579 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 ICAM4Q14773 271 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 POU2AF1Q16633 256 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 HFEQ30201 348 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 KHDC3LQ587J8 217 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 AWAT1Q58HT5 328 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 ZNF787Q6DD87 383 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 HIST2H2BCQ6DN03 193 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 SSX9Q7RTT3 188 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 ZCCHC24Q8N2G6 241 aaKnown RBP12.24□□□□□ -0.45
GABPB1-202ENST00000359031 RCC1LQ96I51 464 aaKnown RBP12.24□□□□□ -0.45
GABPB1-202ENST00000359031 RARRES2Q99969 163 aa12.24□□□□□ -0.45
GABPB1-202ENST00000359031 PLCE1Q9P212 2302 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 LOC102723971A0A1B0GUV8 181 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 C15orf61A6NNL5 157 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 B9A039 149 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 TNFRSF13BO14836 293 aaPredicted RBP12.23□□□□□ -0.45
GABPB1-202ENST00000359031 MBP02144 154 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 SRP19P09132 144 aaKnown RBP12.23□□□□□ -0.45
GABPB1-202ENST00000359031 FGF7P21781 194 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 RPL31P62899 125 aaKnown RBP12.23□□□□□ -0.45
GABPB1-202ENST00000359031 RHEBQ15382 184 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 HAGHQ16775 308 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 SPINK9Q5DT21 86 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 SOHLH1Q5JUK2 328 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 C1orf229Q6ZS94 237 aaPredicted RBP12.23□□□□□ -0.45
GABPB1-202ENST00000359031 ZNF383Q8NA42 475 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 ZNF714Q96N38 554 aa12.23□□□□□ -0.45
GABPB1-202ENST00000359031 FOXA2Q9Y261 457 aaPredicted RBP12.23□□□□□ -0.45
GABPB1-202ENST00000359031 FLNCQ14315 2725 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-202ENST00000359031 NDUFB3O43676 98 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 MMP23AO75900 390 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 HRASP01112 189 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 OR13C7P0DN81 318 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 VDAC2P45880 294 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-202ENST00000359031 ELLP55199 621 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-202ENST00000359031 ZNF726P1Q15940 193 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 LRRC10Q5BKY1 277 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms