RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 HRKO00198 91 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 PSG4Q00888 419 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 FAM168AQ92567 244 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 MS4A3Q96HJ5 214 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 CITED2Q99967 270 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-202ENST00000358808 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
CLIP1-202ENST00000358808 TRAV12-3A0A0B4J271 114 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 HLA-DRB1P01911 266 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 SMIM13P0DJ93 91 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 TSPAN7P41732 249 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 RAG2P55895 527 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 RUNX1Q01196 453 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 KIAA0040Q15053 153 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 PRSS53Q2L4Q9 553 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 SLC25A34Q6PIV7 304 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 HMGCLL1Q8TB92 370 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 PLAC1Q9HBJ0 212 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 FLRT3Q9NZU0 649 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 OR11H12B2RN74 326 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 ZIC3O60481 467 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 CD8AP01732 235 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 ZIC1Q15915 447 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 DTX2Q86UW9 622 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 H1FOOQ8IZA3 346 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-202ENST00000358808 OR11H1Q8NG94 326 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 OR11H2Q8NH07 326 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 TRAF4Q9BUZ4 470 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-202ENST00000358808 PARD6GQ9BYG4 376 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-202ENST00000358808 A0A0G2JLM5 398 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 C7orf66A4D0T2 115 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 SPINT1O43278 529 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 IGF2P01344 180 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 HLA-DQA1P01909 254 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 PMCHL1Q16048 86 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 C3orf36Q3SXR2 165 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 WNT2BQ93097 391 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 S4R3C0 116 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 IGHV1-45A0A0A0MS14 117 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 SYNGR3O43761 229 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 ERGP11308 486 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 FOLR2P14207 255 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 CXCL3P19876 107 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 UBE2V2Q15819 145 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 C9orf40Q8IXQ3 194 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 TRAV24A0A0B4J272 114 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 OR4C45A6NMZ5 311 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 OR51G1Q8NGK1 321 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 OR5AC2Q9NZP5 309 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 CEP290O15078 2479 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 SEC11BP0C7V7 166 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 FAM89BQ8N5H3 189 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 OR9G4Q8NGQ1 327 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 SSBP3Q9BWW4 388 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-202ENST00000358808 EIF3GO75821 320 aaKnown RBP eCLIP8.74□□□□□ -1.01
CLIP1-202ENST00000358808 CELA2AP08217 269 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 EGR1P18146 543 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 RCC1P18754 421 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-202ENST00000358808 FGF12P61328 243 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 RSPO4Q2I0M5 234 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-202ENST00000358808 DMKNQ6E0U4 476 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-202ENST00000358808 TMEM186Q96B77 213 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 WDR34Q96EX3 536 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 TNFSF18Q9UNG2 199 aa8.74□□□□□ -1.01
CLIP1-202ENST00000358808 B9A039 149 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 H0Y980 276 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 IGHV3-48P01763 117 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 HBBP68871 147 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 HOGA1Q86XE5 327 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 MOSP00540 346 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 C8orf88P0DMB2 117 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 BHLHA9Q7RTU4 235 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 C18orf15Q96N68 181 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 SFXN3Q9BWM7 321 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 C7orf69Q9H7B7 122 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 TUBD1Q9UJT1 453 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 TRGV4A0A0C4DH28 118 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 A0A0J9YW62 118 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 CTDSPLO15194 276 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 BIVMQ86UB2 503 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 CYB561D1Q8N8Q1 229 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 OR5A1Q8NGJ0 315 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 CLDND2Q8NHS1 167 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 RHOVQ96L33 236 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 WNT10AQ9GZT5 417 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 EDA2RQ9HAV5 297 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 PSME4Q14997 1843 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 A0A1W2PQF6 199 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 ODAMA1E959 279 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 NPIPB4C9JG80 1138 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 OGG1O15527 345 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 ARL14EPLP0DKL9 152 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 SERF2P84101 59 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 SAMD13Q5VXD3 122 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 SPRED2Q7Z698 418 aa8.73□□□□□ -1.01
CLIP1-202ENST00000358808 ZNF107Q9UII5 783 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-202ENST00000358808 SCTP09683 121 aa8.72□□□□□ -1.01
CLIP1-202ENST00000358808 OR1P1Q8NH06 330 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms